| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is dinG [H]
Identifier: 209398717
GI number: 209398717
Start: 960737
End: 963025
Strand: Direct
Name: dinG [H]
Synonym: ECH74115_0948
Alternate gene names: 209398717
Gene position: 960737-963025 (Clockwise)
Preceding gene: 209396431
Following gene: 209400968
Centisome position: 17.24
GC content: 53.08
Gene sequence:
>2289_bases GTGCCGTCGAATTTTCAATCAAATATATTGCGAGAGGGCGTGTTTGCGAGCCGCTTTCCAGAAACAGAAAAACCATTACC CCTGAAAACCGAAAAATGCCACAATATTGGCTGTTTATACAGTATTTCAGGTTTTCTCATGGCATTAACCGCCGCGCTTA AAGCGCAAATTGCCGCCTGGTATAAGGCGCTTCAGGAACAGATCCCCGACTTTATTCCCCGTGCGCCGCAGCGGCAGATG ATTGCGGACGTCGCCAAAACGCTGGCCGGAGAAGAAGGGCGGCATCTGGCGATTGAAGCCCCCACTGGCGTTGGGAAAAC GCTCTCCTATTTGATTCCCGGCATCGCCATTGCCCGCGAAGAGCAAAAAACGCTGGTGGTGAGTACCGCCAACGTGGCAT TGCAGGATCAGATCTACAGCAAAGATTTGCCACTGCTGAAAAAGATCATTCCCGATCTTAAATTCACTGCCGCTTTTGGG CGTGGGCGCTACGTTTGCCCGCGTAATCTGACGGCGCTTGCCAGCACTGAGCCCACGCAACAGGATCTGCTGGCGTTTCT TGACGACGAACTGACGCCAAATAATCAGGAAGAGCAAAAACGTTGTGCGAAGCTGAAGGGCGATCTCGACACTTATAAAT GGGATGGTCTGCGCGATCATACGGATATCGCTATAGATGACGATCTCTGGCGTCGTTTAAGTACCGACAAAGCCAGCTGC CTCAACCGCAACTGTTACTACTATCGCGAATGCCCGTTTTTTGTCGCTCGTCGGGAAATTCAGGAAGCGGAAGTGGTGGT GGCAAACCATGCGCTGGTGATGGCGGCGATGGAAAGCGAAGCCGTATTGCCTGACCCGAAAAATTTACTGCTGGTGCTGG ACGAAGGCCATCACCTGCCAGATGTGGCGCGGGATGCGCTGGAGATGAGTGCCGAAATCACCGCGCCATGGTATCGGCTA CAGCTGGACTTGTTCACGAAACTGGTCGCTACCTGCATGGAGCAGTTTCGCCCGAAGACCATCCCGCCGTTGGCGATCCC TGAACGTTTGAATGCGCATTGTGAAGAGCTGTATGAGCTTATCGCCTCATTAAACAACATTCTCAATCTCTACATGCCTG CCGGGCAGGAAGCAGAACACCGTTTTGCGATGGGCGAACTGCCTGATGAAGTGCTGGAGATCTGCCAGCGGCTGGCAAAA CTCACCGAGATGCTGCGTGGTCTGGCGGAGTTATTTCTTAACGATTTAAGTGAGAAAACCGGCAGCCATGACATTGTACG TCTGCATCGGTTGATTTTGCAGATGAACCGCGCGTTGGGGATGTTCGAGGCGCAAAGCAAACTCTGGCGGCTGGCTTCGC TGGCGCAATCTTCCGGTGCACCGGTGACCAAATGGGCGACGCGGGAAGAGCGCGAAGGGCAGCTACACCTCTGGTTTCAC TGCGTGGGAATACGTGTCAGCGATCAGCTGGAAAGGCTGCTGTGGCGCAGTATTCCGCACATTATTGTCACCTCCGCAAC CTTGCGTTCGCTGAACAGTTTTTCGCGTTTGCAGGAGATGAGCGGGCTGAAAGAGAAAGCGGGCGACCGTTTTGTGGCGC TGGATTCCCCCTTTAACCACTGCGAACAGGGCAAAATTGTTATTCCCCGGATGCGCGTTGAGCCTTCCATCGACAACGAA GAACAGCATATTGCTGAAATGGCGGCCTTTTTCCGTGAGCAGGTGGAGAGCAAAAAACATCTCGGTATGTTGGTGCTGTT TGCCAGCGGGCGTGCGATGCAGCGCTTTCTCGACTATGTGACGGATTTACGTCTGATGTTGCTGGTGCAGGGCGATCAGC CGCGTTACCGTTTAGTTGAACTGCACCGCAAACGCGTCGCCAACGGTGAGCGTAGTGTGCTGGTGGGCTTACAGTCATTT GCCGAAGGGCTTGATTTGAAAGGTGATATGCTCAGCCAGGTGCATATCCACAAAATCGCTTTTCCGCCTATCGACAGCCC GGTGGTGATCACTGAAGGGGAATGGCTGAAAAGCCTCAACCGCTATCCATTTGAGGTGCAAAGCCTGCCGAGCGCCTCGT TTAACCTGATTCAGCAGGTTGGGCGACTGATTCGAAGTCACGGTTGCTGGGGCGAAGTGGTGATTTACGATAAACGCTTG CTGACCAAAAATTATGGCAAGCGACTACTGGATGCATTACCGGTATTTCCGATAGAGCAACCGGAAGTCCCTGAAGGTAT AGTTAAAAAGAAAGAAAAAACGAAATCCCCACGCCGTCGGCGGCGTTAA
Upstream 100 bases:
>100_bases GGTCGGCAATACCGGTTCCTGCGAAGCGATGACGGCGGCAATTGTAACCACGAAATGCGGTATCACTTGCTGTTTTCTGC CCTGAAGACTGGCGCTCACT
Downstream 100 bases:
>100_bases TGATGTGAGTCAGGTAAGGAGTCGTAAATGGACTATCGCAAAATCATTAAAGAGATCGGGCGCGGGAAAAACCACGCGCG CGATTTAGACCGGGATACTG
Product: ATP-dependent DNA helicase DinG
Products: NA
Alternate protein names: DNA-damage-inducible protein G [H]
Number of amino acids: Translated: 762; Mature: 761
Protein sequence:
>762_residues MPSNFQSNILREGVFASRFPETEKPLPLKTEKCHNIGCLYSISGFLMALTAALKAQIAAWYKALQEQIPDFIPRAPQRQM IADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFG RGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASC LNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRL QLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAK LTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFH CVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNE EQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSF AEGLDLKGDMLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRL LTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR
Sequences:
>Translated_762_residues MPSNFQSNILREGVFASRFPETEKPLPLKTEKCHNIGCLYSISGFLMALTAALKAQIAAWYKALQEQIPDFIPRAPQRQM IADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFG RGRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASC LNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRL QLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAK LTEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFH CVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNE EQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSF AEGLDLKGDMLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRL LTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR >Mature_761_residues PSNFQSNILREGVFASRFPETEKPLPLKTEKCHNIGCLYSISGFLMALTAALKAQIAAWYKALQEQIPDFIPRAPQRQMI ADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIAREEQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGR GRYVCPRNLTALASTEPTQQDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASCL NRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLPDVARDALEMSAEITAPWYRLQ LDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYELIASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKL TEMLRGLAELFLNDLSEKTGSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFHC VGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNHCEQGKIVIPRMRVEPSIDNEE QHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYVTDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFA EGLDLKGDMLSQVHIHKIAFPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRLL TKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR
Specific function: Probable helicase involved in DNA repair and perhaps also replication [H]
COG id: COG1199
COG function: function code KL; Rad3-related DNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1787018, Length=716, Percent_Identity=99.7206703910614, Blast_Score=1470, Evalue=0.0, Organism=Escherichia coli, GI1788110, Length=702, Percent_Identity=28.7749287749288, Blast_Score=200, Evalue=2e-52,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR010614 - InterPro: IPR011545 - InterPro: IPR014013 - InterPro: IPR006555 - InterPro: IPR001650 [H]
Pfam domain/function: PF00270 DEAD; PF06733 DEAD_2 [H]
EC number: =3.6.4.12 [H]
Molecular weight: Translated: 86643; Mature: 86512
Theoretical pI: Translated: 7.58; Mature: 7.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNFQSNILREGVFASRFPETEKPLPLKTEKCHNIGCLYSISGFLMALTAALKAQIAAW CCCCHHHHHHHHCCHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIARE HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHEECC EQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQ CCCEEEEEECCHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCEECCCCCEECCCCCCCH QDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASC HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHCCCHHHH LNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLP HCCCCEEEECCCHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCH DVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYEL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH IASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKT HHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEE CVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNH EECCCHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCCC CEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYV CCCCCEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHH TDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDMLSQVHIHKIA HHHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEE FPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRL CCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHH LTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHCC >Mature Secondary Structure PSNFQSNILREGVFASRFPETEKPLPLKTEKCHNIGCLYSISGFLMALTAALKAQIAAW CCCHHHHHHHHCCHHHCCCCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH YKALQEQIPDFIPRAPQRQMIADVAKTLAGEEGRHLAIEAPTGVGKTLSYLIPGIAIARE HHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHCCHHEECC EQKTLVVSTANVALQDQIYSKDLPLLKKIIPDLKFTAAFGRGRYVCPRNLTALASTEPTQ CCCEEEEEECCHHHHHHHHHCCCHHHHHHCCCCEEEEECCCCCEECCCCCEECCCCCCCH QDLLAFLDDELTPNNQEEQKRCAKLKGDLDTYKWDGLRDHTDIAIDDDLWRRLSTDKASC HHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECHHHHHHHCCCHHHH LNRNCYYYRECPFFVARREIQEAEVVVANHALVMAAMESEAVLPDPKNLLLVLDEGHHLP HCCCCEEEECCCHHHHHHHHHHHHEEHCCCCEEEEECCCCCCCCCCCCEEEEEECCCCCH DVARDALEMSAEITAPWYRLQLDLFTKLVATCMEQFRPKTIPPLAIPERLNAHCEELYEL HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH IASLNNILNLYMPAGQEAEHRFAMGELPDEVLEICQRLAKLTEMLRGLAELFLNDLSEKT HHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GSHDIVRLHRLILQMNRALGMFEAQSKLWRLASLAQSSGAPVTKWATREEREGQLHLWFH CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCCCCCCCCCEEEEEE CVGIRVSDQLERLLWRSIPHIIVTSATLRSLNSFSRLQEMSGLKEKAGDRFVALDSPFNH EECCCHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHHHHHCHHHHCCCEEEEECCCCCC CEQGKIVIPRMRVEPSIDNEEQHIAEMAAFFREQVESKKHLGMLVLFASGRAMQRFLDYV CCCCCEEECCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHH TDLRLMLLVQGDQPRYRLVELHRKRVANGERSVLVGLQSFAEGLDLKGDMLSQVHIHKIA HHHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHEEE FPPIDSPVVITEGEWLKSLNRYPFEVQSLPSASFNLIQQVGRLIRSHGCWGEVVIYDKRL CCCCCCCEEEECCHHHHHCCCCCCCHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECHHH LTKNYGKRLLDALPVFPIEQPEVPEGIVKKKEKTKSPRRRRR HHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]