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The map label for this gene is rhsE [H]

Identifier: 209398385

GI number: 209398385

Start: 669476

End: 670810

Strand: Reverse

Name: rhsE [H]

Synonym: ECH74115_0645

Alternate gene names: 209398385

Gene position: 670810-669476 (Counterclockwise)

Preceding gene: 209396800

Following gene: 209400670

Centisome position: 12.04

GC content: 53.26

Gene sequence:

>1335_bases
GTGACAGCCTCAGGCACCGGGCTGGGCTATGGCGAAGGCGATGAGTCCTATGGCTATGACAGCTGTGGCTACCTGAAGGC
GCAGTCTGCGGGCGGGCACCGGATAAGTGAAGAGACTGACCAGTATGCCGGAGGCCACCGGCTGAAACAGGCCGGAAACA
CGCAGTATGACTATGACGCCGCAGGCCGGATGGTCAGCCGCACCAGACACCGTGACGGCTATCGCCCGGAAACAGAGCGG
TTCCGGTGGGACAGCCGGGACCAGCTGACCGGGTATTGCAGCGCACAGGGTGAGCAGTGGGAATACCGCCACGACGCCAG
CGGCAGACGAACAGAGAAACGCTGCGACCGGAAGAAAATCCGCTTCACGTACCTGTGGGACGGCGACAGTATTGCGGAAA
TCCGGGAATACCGCGATGATGAACTGTACAGCGTACGGCACCTGGTGTTTAACGGCTTTGAGCTGATAAGCCAGCAGTGC
AGCCGGGTACGGCAGCCGCACCCGTCCGTGGCCCCGCAGTGGGTGACACGAACGAATCATGCGGTGAACGACCTGACGGG
CCGTCCGCTGATGCTCTTTAACAGTGAAGGTAAAACCGTCTGGCGGCCGGGACAGACCAGCCTGTGGGGGCTGGCACTCA
GCCTGCCCGCAGACACAGACTACCCGGACCCGCGCGGGGAGCGGGACGCGGAAGCCGACCCCGGCCTGCTGTATGCAGGA
CAGTGGCAGGATGCAGAATCGGGGTTGTGCTATAACCGGTTCCGATATTACGAGCCGGAAACCGGGATGTACCTGGTGAG
TGATCCACTGGGGTTGCAGGGAGGGGAGCAGACTTACCGGTATGTGCCGAATCCTTGTGGGTGGGTTGATCCGCTGGGAT
TGGCTGCAAGTTCTAAAATCAGCAGTTTGATGGACTATATTGGCGATGGTCGTCGTGTTAGTGGGCATACGGGTTTCCTG
GATGGGGTTCGTTTATCACGTAGTCAAATAAACAATATTGCTAAAGAAATGGAGAAGCTAGGAATTAAAGTAATAAGGAA
AGCAGATAAATATTTGCCACCAAATGCTAGGGCAGCTTTTGATTATGGTCTTCGCAATATTTATCTTAGGAAAAATGCTA
CCTTATATGAGGTGTATCATGAAGTGATTCATGCTAAGCAATTTGCGAAAATTGGACGAGAAGCATACGAAGCACTAGGA
CGTTTATCTAGGGAGGAACACGTTCTAAATGAAATATTAAAAAGTAAAAATTTATTCAATGAAGCGGAAATAGCTCATGC
CATAAAATATGTTGAGGGATTGAGAGAAAAATTCATGATGGGACTAATAAATTGA

Upstream 100 bases:

>100_bases
CGACAGCGCGGGTAACGTATCAGGCGTCACCAGCCGGGAAGATTACGGACGGGAAACACAGCGGGAGTACCGGCTTGACC
GGAACGGCCAGGTCACGGCG

Downstream 100 bases:

>100_bases
TAAAACATAACAAAATAACTATCGAAATGGCTCTTGACTTGGCTCGGCGTGAGTTAGAGTTAAGGGAAATTCCTTATATT
AAAAATAGTCTACATGCCAA

Product: Rhs core protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTASGTGLGYGEGDESYGYDSCGYLKAQSAGGHRISEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTRHRDGYRPETER
FRWDSRDQLTGYCSAQGEQWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDELYSVRHLVFNGFELISQQC
SRVRQPHPSVAPQWVTRTNHAVNDLTGRPLMLFNSEGKTVWRPGQTSLWGLALSLPADTDYPDPRGERDAEADPGLLYAG
QWQDAESGLCYNRFRYYEPETGMYLVSDPLGLQGGEQTYRYVPNPCGWVDPLGLAASSKISSLMDYIGDGRRVSGHTGFL
DGVRLSRSQINNIAKEMEKLGIKVIRKADKYLPPNARAAFDYGLRNIYLRKNATLYEVYHEVIHAKQFAKIGREAYEALG
RLSREEHVLNEILKSKNLFNEAEIAHAIKYVEGLREKFMMGLIN

Sequences:

>Translated_444_residues
MTASGTGLGYGEGDESYGYDSCGYLKAQSAGGHRISEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTRHRDGYRPETER
FRWDSRDQLTGYCSAQGEQWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDELYSVRHLVFNGFELISQQC
SRVRQPHPSVAPQWVTRTNHAVNDLTGRPLMLFNSEGKTVWRPGQTSLWGLALSLPADTDYPDPRGERDAEADPGLLYAG
QWQDAESGLCYNRFRYYEPETGMYLVSDPLGLQGGEQTYRYVPNPCGWVDPLGLAASSKISSLMDYIGDGRRVSGHTGFL
DGVRLSRSQINNIAKEMEKLGIKVIRKADKYLPPNARAAFDYGLRNIYLRKNATLYEVYHEVIHAKQFAKIGREAYEALG
RLSREEHVLNEILKSKNLFNEAEIAHAIKYVEGLREKFMMGLIN
>Mature_443_residues
TASGTGLGYGEGDESYGYDSCGYLKAQSAGGHRISEETDQYAGGHRLKQAGNTQYDYDAAGRMVSRTRHRDGYRPETERF
RWDSRDQLTGYCSAQGEQWEYRHDASGRRTEKRCDRKKIRFTYLWDGDSIAEIREYRDDELYSVRHLVFNGFELISQQCS
RVRQPHPSVAPQWVTRTNHAVNDLTGRPLMLFNSEGKTVWRPGQTSLWGLALSLPADTDYPDPRGERDAEADPGLLYAGQ
WQDAESGLCYNRFRYYEPETGMYLVSDPLGLQGGEQTYRYVPNPCGWVDPLGLAASSKISSLMDYIGDGRRVSGHTGFLD
GVRLSRSQINNIAKEMEKLGIKVIRKADKYLPPNARAAFDYGLRNIYLRKNATLYEVYHEVIHAKQFAKIGREAYEALGR
LSREEHVLNEILKSKNLFNEAEIAHAIKYVEGLREKFMMGLIN

Specific function: Rhs elements have a nonessential function. They may play an important role in the natural ecology of the cell [H]

COG id: COG3209

COG function: function code M; Rhs family protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RHS family [H]

Homologues:

Organism=Escherichia coli, GI1786706, Length=210, Percent_Identity=30.4761904761905, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786917, Length=129, Percent_Identity=37.984496124031, Blast_Score=75, Evalue=6e-15,
Organism=Escherichia coli, GI48994942, Length=112, Percent_Identity=39.2857142857143, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1790020, Length=111, Percent_Identity=39.6396396396396, Blast_Score=69, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001826
- InterPro:   IPR022385
- InterPro:   IPR006530 [H]

Pfam domain/function: PF03527 RHS; PF05593 RHS_repeat [H]

EC number: NA

Molecular weight: Translated: 50615; Mature: 50484

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASGTGLGYGEGDESYGYDSCGYLKAQSAGGHRISEETDQYAGGHRLKQAGNTQYDYDA
CCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCHHHHHCCCCCCCHHH
AGRMVSRTRHRDGYRPETERFRWDSRDQLTGYCSAQGEQWEYRHDASGRRTEKRCDRKKI
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHE
RFTYLWDGDSIAEIREYRDDELYSVRHLVFNGFELISQQCSRVRQPHPSVAPQWVTRTNH
EEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
AVNDLTGRPLMLFNSEGKTVWRPGQTSLWGLALSLPADTDYPDPRGERDAEADPGLLYAG
HHHHCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEC
QWQDAESGLCYNRFRYYEPETGMYLVSDPLGLQGGEQTYRYVPNPCGWVDPLGLAASSKI
CCCCCCCCCEEHHHEEECCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHH
SSLMDYIGDGRRVSGHTGFLDGVRLSRSQINNIAKEMEKLGIKVIRKADKYLPPNARAAF
HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
DYGLRNIYLRKNATLYEVYHEVIHAKQFAKIGREAYEALGRLSREEHVLNEILKSKNLFN
HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
EAEIAHAIKYVEGLREKFMMGLIN
HHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TASGTGLGYGEGDESYGYDSCGYLKAQSAGGHRISEETDQYAGGHRLKQAGNTQYDYDA
CCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCHHHHHCCCCCCCHHH
AGRMVSRTRHRDGYRPETERFRWDSRDQLTGYCSAQGEQWEYRHDASGRRTEKRCDRKKI
HHHHHHHHHHCCCCCCCHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHE
RFTYLWDGDSIAEIREYRDDELYSVRHLVFNGFELISQQCSRVRQPHPSVAPQWVTRTNH
EEEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCC
AVNDLTGRPLMLFNSEGKTVWRPGQTSLWGLALSLPADTDYPDPRGERDAEADPGLLYAG
HHHHCCCCEEEEECCCCCEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEC
QWQDAESGLCYNRFRYYEPETGMYLVSDPLGLQGGEQTYRYVPNPCGWVDPLGLAASSKI
CCCCCCCCCEEHHHEEECCCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHH
SSLMDYIGDGRRVSGHTGFLDGVRLSRSQINNIAKEMEKLGIKVIRKADKYLPPNARAAF
HHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
DYGLRNIYLRKNATLYEVYHEVIHAKQFAKIGREAYEALGRLSREEHVLNEILKSKNLFN
HHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCH
EAEIAHAIKYVEGLREKFMMGLIN
HHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1766878; 7934896 [H]