| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is insI1 [H]
Identifier: 209398348
GI number: 209398348
Start: 1327902
End: 1328213
Strand: Reverse
Name: insI1 [H]
Synonym: ECH74115_1311
Alternate gene names: 209398348
Gene position: 1328213-1327902 (Counterclockwise)
Preceding gene: 209397281
Following gene: 209398338
Centisome position: 23.84
GC content: 48.72
Gene sequence:
>312_bases ATGAGACGAACATTTACAGCAGAGGAAAAAGCCTCTGTTTTTGAACTATGGAAGAACGGAACAGGCTTCAGTGAAATAGC GAATATCCTGGGTTCAAAACCCGGAACGATCTTCACTATGTTAAGGGATACTGGCGGCATAAAACCCCATGAGCGTAAGC GGGCTGTAGCTCACCTGACACTGTCTGAGCGCGAGGAGATACGAGCTGGTTTGTCAGCCAAAATGAGCATTCGTGCGATA GCTACTGCGCTGAATCGCAGTCCTTCGACGATCTCACGTGAAGTTCAGCGTAATCGTAAGCGTACAGCCTGA
Upstream 100 bases:
>100_bases CGCGTATTTTTCAGCGACTCCTGTGCAAAATACGCTGTTGTAGATTCAATTGGTCAACGCAACAGTTATGTGAAAACATG GGGTTGCGGAGGTTTTTTGA
Downstream 100 bases:
>100_bases ACCGTCTGGTCAGAATCTGACGAATTAGACAAAGTGGTGTCCACCAAATAAGTAGTGGGAACCAAAGTATCAGATATGCA GAAAAATGTGACTCCCGGCA
Product: transposase InsI for insertion sequence element IS30B/C/D
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 103; Mature: 103
Protein sequence:
>103_residues MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAI ATALNRSPSTISREVQRNRKRTA
Sequences:
>Translated_103_residues MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAI ATALNRSPSTISREVQRNRKRTA >Mature_103_residues MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLTLSEREEIRAGLSAKMSIRAI ATALNRSPSTISREVQRNRKRTA
Specific function: Required for the transposition of the insertion element (Potential) [H]
COG id: COG2826
COG function: function code L; Transposase and inactivated derivatives, IS30 family
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 integrase catalytic domain [H]
Homologues:
Organism=Escherichia coli, GI1786450, Length=101, Percent_Identity=99.009900990099, Blast_Score=201, Evalue=9e-54, Organism=Escherichia coli, GI1790736, Length=101, Percent_Identity=99.009900990099, Blast_Score=201, Evalue=9e-54, Organism=Escherichia coli, GI1787671, Length=101, Percent_Identity=99.009900990099, Blast_Score=201, Evalue=9e-54,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001584 - InterPro: IPR012337 - InterPro: IPR001598 [H]
Pfam domain/function: PF00665 rve [H]
EC number: NA
Molecular weight: Translated: 11512; Mature: 11512
Theoretical pI: Translated: 11.88; Mature: 11.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLT CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCC LSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRKRTA HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MRRTFTAEEKASVFELWKNGTGFSEIANILGSKPGTIFTMLRDTGGIKPHERKRAVAHLT CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHHCC LSEREEIRAGLSAKMSIRAIATALNRSPSTISREVQRNRKRTA HHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]