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The map label for this gene is yafE [H]

Identifier: 209398090

GI number: 209398090

Start: 235312

End: 236082

Strand: Direct

Name: yafE [H]

Synonym: ECH74115_0222

Alternate gene names: 209398090

Gene position: 235312-236082 (Clockwise)

Preceding gene: 209396743

Following gene: 209400502

Centisome position: 4.22

GC content: 49.03

Gene sequence:

>771_bases
ATGACAACACAATCCCACCATGACCACGTAGAAAAGCAGTTTAGCTCTCAAGCCAGCGAATATCTGACCAGTACCGTACA
TGCATCCGGACGAGATTTACAGCTCCTGGCGGTGTGTCTGGCTGATTATCCTGATGCAAGTGTACTTGATATGGGCTGCG
GAGCAGGGCATGCCAGCTTTGTCGCTGCGCAAAATGTGAGCACGGTGGTGGCGTATGACTTATCTGCCCAAATGCTGGAT
GTCGTGGCACAAGCTGCCGAAGTCCGGCAACTGAAAAATATCACCACCCGCCAGGGGTATGCCGAAAGTCTGCCATTTGC
CGATAACGCATTTGATATTGTTATCAGCCGTTATTCTGCCCATCACTGGCATGATGTTGGTGCAGCACTGCGTGAAGTGA
ACCGGATATTGAAACCTGGCGGTAGGCTGATTGTGATGGACGTAATGTCTCCGGGCCACCCAGTGCGCGACATCTGGTTA
CAGACGGTAGAAGCATTATGCGATACCTCTCACGTACGAAACTACGCCAGCGGTGAGTGGTTGAGGTTAATCAATGAAGC
CAATCTGATAGTTGATAATTTAATTACAGATAAGTTACCGCTGGAATTTTCTTCATGGGTCGCGAGAATGCGTACGCCAG
AAGCGTTAGTAGACGCTATTCGCATTTACCAACAGAGCGCATCGACAGAGGTGAGAACGTATTTTGCCTTGCAGAATGAT
GGCTCTTTCACCAGTGATATCATCATGGTAGATGCACATAAAGCGGCATAA

Upstream 100 bases:

>100_bases
GTCCCGGCAAGCCTGATAAATAAGGTATGTCAGGTCTGCCACAGGGCAGACCAACGTTTGGAGCTGCCCTTTTATACTCA
AACAACAAAAGGACAGTGCA

Downstream 100 bases:

>100_bases
ATAAAAAAGGCACCGGGGGAATCGGTGCCTTTCTATTATCTGGTTTGTCAGGAGTCTGGCATGCTGTTGTTTTTCACAAA
CAACGTCAGCTTATCGCCTG

Product: methyltransferase, UbiE/COQ5 family

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 256; Mature: 255

Protein sequence:

>256_residues
MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQLLAVCLADYPDASVLDMGCGAGHASFVAAQNVSTVVAYDLSAQMLD
VVAQAAEVRQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWL
QTVEALCDTSHVRNYASGEWLRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQND
GSFTSDIIMVDAHKAA

Sequences:

>Translated_256_residues
MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQLLAVCLADYPDASVLDMGCGAGHASFVAAQNVSTVVAYDLSAQMLD
VVAQAAEVRQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWL
QTVEALCDTSHVRNYASGEWLRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQND
GSFTSDIIMVDAHKAA
>Mature_255_residues
TTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQLLAVCLADYPDASVLDMGCGAGHASFVAAQNVSTVVAYDLSAQMLDV
VAQAAEVRQLKNITTRQGYAESLPFADNAFDIVISRYSAHHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWLQ
TVEALCDTSHVRNYASGEWLRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQNDG
SFTSDIIMVDAHKAA

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

Organism=Escherichia coli, GI1786404, Length=205, Percent_Identity=93.6585365853659, Blast_Score=393, Evalue=1e-111,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 28257; Mature: 28126

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQLLAVCLADYPDASVLDMGCGAGHASF
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHH
VAAQNVSTVVAYDLSAQMLDVVAQAAEVRQLKNITTRQGYAESLPFADNAFDIVISRYSA
HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCC
HHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWLQTVEALCDTSHVRNYASGEW
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
LRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQND
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEEECC
GSFTSDIIMVDAHKAA
CCCCCCEEEEECCCCC
>Mature Secondary Structure 
TTQSHHDHVEKQFSSQASEYLTSTVHASGRDLQLLAVCLADYPDASVLDMGCGAGHASF
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEECCCCCCHHHH
VAAQNVSTVVAYDLSAQMLDVVAQAAEVRQLKNITTRQGYAESLPFADNAFDIVISRYSA
HHHCCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCHHHHHHHHHCC
HHWHDVGAALREVNRILKPGGRLIVMDVMSPGHPVRDIWLQTVEALCDTSHVRNYASGEW
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHH
LRLINEANLIVDNLITDKLPLEFSSWVARMRTPEALVDAIRIYQQSASTEVRTYFALQND
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEEEEECC
GSFTSDIIMVDAHKAA
CCCCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1663890; 9278503 [H]