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The map label for this gene is yagQ [H]

Identifier: 209398027

GI number: 209398027

Start: 334058

End: 335014

Strand: Reverse

Name: yagQ [H]

Synonym: ECH74115_0329

Alternate gene names: 209398027

Gene position: 335014-334058 (Counterclockwise)

Preceding gene: 209395976

Following gene: 209399565

Centisome position: 6.01

GC content: 59.87

Gene sequence:

>957_bases
ATGTCATACCCGCTTTTTGATAAAGACGAACACTGGCATAAGCCAGAGCAGGCGTTTCTCACCGATGACCACCGGACCAT
TCTGCGCTTCGCCGTAGAGGCGCTAATGTCCGGTAAAGGAGCGGTGCTGGTGACGCTGGTGGAGATACGCGGCGGCGCGG
CGCGCCCGCTCGGGGCGCAGATGGTGGTGCGCGAAGATGGTCGTTACTGCGGTTTTGTCTCTGGCGGCTGCGTGGAGGCC
GCTGCCGCTTTTGAAGCGCTGGAGATGATGGGCTCAGGCTGCGATCGCGAAATTCGCTATGGCGAAGGTTCGCCGTGGTT
TGACATCGTTCTGCCCTGCGGCGGTGGGATCACGCTGACGCTCCATAAACTACGCTCGGCACAGCCTCTGCTCGCCGTGC
TGAACCGCCTGGAACAGAGAAAACCGGCGGGGCTGCGCTACGATCCGCAAGCACAATCGTTGGTGTGCCTGCCCACGCAA
ACCCGAACGGGCTGGAATCTCAATGGCTTTGAGGTGGGGTTCAGGCCATGCGTCAGGCTGATGATTTACGGACGTTCTCT
TGAGGCGCAGGCAACCGCGAGTCTTGCAGCAGCCACAGGCTATGACAGCCATATCTTCGATCTTTTTCCGGCCTCAGCCA
GCGCTCAGATCGATACCGATACGGCGGTCATTTTGCTGTGCCATGATCTCAACCGGGAGCTGCCAGTGTTGCAGGCCGCG
CGAGAAGCAAAACCCTTTTATCTCGGCGCATTGGGCAGCTATCGAACCCACACGTTACGTCTGCAAAAGCTCCACGAGCT
GGGATGGTCCAGGGAGGAGACAGCGCAAATCCGGGCACCCGTCGGGATATTCCCCAAAGCCCGGAATGCGCATACACTGG
CCCTCTCCGTGCTGGCAGAAGTCGCCTCTGTACGTCTCCATCAGGAGGAGGATTCATGCCTGCCCCCGTCGTCCTGA

Upstream 100 bases:

>100_bases
CAACGCGGTGTATAACGCCACCGGTATTCGGGTACGCGATTATCCCATCACTCTGGATAAGCTGCTCGATAAGCTGCCGG
ATGTGGTTTAAGGAGGAACA

Downstream 100 bases:

>100_bases
TCCTTGCGGCCGGGCGTGGAAAGCGCTTTCTCACCTCCGGGGGAAATACCATAAATTAAGAGAAAAATTTGCAGTAGCCG
TTTTAGAAAATCACCTAAAT

Product: putative xanthine dehydrogenase accessory factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 318; Mature: 317

Protein sequence:

>318_residues
MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEA
AAAFEALEMMGSGCDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQ
TRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARNAHTLALSVLAEVASVRLHQEEDSCLPPSS

Sequences:

>Translated_318_residues
MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEA
AAAFEALEMMGSGCDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQ
TRTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARNAHTLALSVLAEVASVRLHQEEDSCLPPSS
>Mature_317_residues
SYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQMVVREDGRYCGFVSGGCVEAA
AAFEALEMMGSGCDREIRYGEGSPWFDIVLPCGGGITLTLHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQT
RTGWNLNGFEVGFRPCVRLMIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAAR
EAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARNAHTLALSVLAEVASVRLHQEEDSCLPPSS

Specific function: Unknown

COG id: COG1975

COG function: function code O; Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786477, Length=318, Percent_Identity=98.7421383647799, Blast_Score=644, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003777 [H]

Pfam domain/function: PF02625 XdhC_CoxI [H]

EC number: NA

Molecular weight: Translated: 34842; Mature: 34711

Theoretical pI: Translated: 6.84; Mature: 6.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQ
CCCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCE
MVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGCDREIRYGEGSPWFDIVLPCGGGITLT
EEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCEEEE
LHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRL
EEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCHHHHHHH
MIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
HHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCEECCCCEEEEEEECCCCCCHHHHHH
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARNAHTLALSVLAE
HHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCHHHHHHHHHH
VASVRLHQEEDSCLPPSS
HHHHHEECCCCCCCCCCC
>Mature Secondary Structure 
SYPLFDKDEHWHKPEQAFLTDDHRTILRFAVEALMSGKGAVLVTLVEIRGGAARPLGAQ
CCCCCCCCCCCCCCCCCEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCE
MVVREDGRYCGFVSGGCVEAAAAFEALEMMGSGCDREIRYGEGSPWFDIVLPCGGGITLT
EEEECCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEEECCCCEEEE
LHKLRSAQPLLAVLNRLEQRKPAGLRYDPQAQSLVCLPTQTRTGWNLNGFEVGFRPCVRL
EEHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEECCHHHHHHH
MIYGRSLEAQATASLAAATGYDSHIFDLFPASASAQIDTDTAVILLCHDLNRELPVLQAA
HHCCCCCCCHHHHHHHHHCCCCCCEEEECCCCCCCEECCCCEEEEEEECCCCCCHHHHHH
REAKPFYLGALGSYRTHTLRLQKLHELGWSREETAQIRAPVGIFPKARNAHTLALSVLAE
HHCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCHHHEECCCCCCCCCCCCHHHHHHHHHH
VASVRLHQEEDSCLPPSS
HHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]