| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397999
Identifier: 209397999
GI number: 209397999
Start: 1575518
End: 1576258
Strand: Direct
Name: 209397999
Synonym: ECH74115_1630
Alternate gene names: NA
Gene position: 1575518-1576258 (Clockwise)
Preceding gene: 209398613
Following gene: 209397262
Centisome position: 28.28
GC content: 58.43
Gene sequence:
>741_bases ATGCCAACACCAAATCCTCTGGCACCGGTGAAAGGGGCCGGGACCACACTGTGGGTTTATAACGGGAACGGCGACCCATA TGCAAACCCGCTTTCAGACAATGACTGGTCGCGTCTGGCAAAGGTTAAAGACCTGACGCCCGGCGAACTGACCGCTGAGT CCTATGACGACAGTTATCTCGATGATGAAGATGCGGACTGGGCCGCGACCGGACAGGGGCAGAAATCCGCTGGAGATACC AGCTTCACGCTGGCGTGGATGCCCGGAGAGCAGGGGCAGCAGGCGCTGCTGGCGTGGTTTAATGAAGGTGATACCCGTGC CTATAAAATCCGCTTCCCGAACGGCACGGTCGATGTGTTCCGCGGCTGGGTCAGCAGTATCGGTAAGGCGGTGACGGCGA AGGAAGTGATCACCCGCACGGTGAAAGTCACCAACGTGGGACGTCCGTCGATGGCAGAAGATCGCAGCACGGTAACAGCG GCAACCGGCATGACCGTGACGCCTGCCAGCACCTCGGTGGTGAAAGGGCAGAGCACGACGCTGACCGTGGCATTCCAGCC GGAAGGCGCAACCGACAAGAGCTTCCGTGCGGTGTCTGCGGATAAAACAAAAGCCACCGTGTCGGTCAGTGGTATGACCA TCACCGTGAAAGGTGTTGCTGCAGGCAAGGTCAACATTCCGGTCGTATCCGGTAATGGTGAGTTTGCTGCGGTTGCAGAA ATCAACGTCACCGCCAGTTAA
Upstream 100 bases:
>100_bases ATGGTGGCCAGTGGCTATGACTACCGGCGCGACGATGATGCGGGCCTGTGGAGTTCAGCCGATCTGACTTATGTCATTAC CTATGAAATGTGAGGACGAT
Downstream 100 bases:
>100_bases TCCGGAGAATCAGCGATGTTCCTGAAAACCGAATCATTTGAACATAACGGCGTGACCGTCACGCTTTCTGAACTGTCAGC CCTGCAGCGTATTGAGCATC
Product: major tail protein V
Products: NA
Alternate protein names: Tail Protein; Gifsy-2 Prophage VmtV; Ig Domain-Containing Domain-Containing Protein; Tail-Like Protein
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPTPNPLAPVKGAGTTLWVYNGNGDPYANPLSDNDWSRLAKVKDLTPGELTAESYDDSYLDDEDADWAATGQGQKSAGDT SFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTA ATGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVSGNGEFAAVAE INVTAS
Sequences:
>Translated_246_residues MPTPNPLAPVKGAGTTLWVYNGNGDPYANPLSDNDWSRLAKVKDLTPGELTAESYDDSYLDDEDADWAATGQGQKSAGDT SFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTA ATGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVSGNGEFAAVAE INVTAS >Mature_245_residues PTPNPLAPVKGAGTTLWVYNGNGDPYANPLSDNDWSRLAKVKDLTPGELTAESYDDSYLDDEDADWAATGQGQKSAGDTS FTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVFRGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAA TGMTVTPASTSVVKGQSTTLTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVSGNGEFAAVAEI NVTAS
Specific function: Unknown
COG id: COG5492
COG function: function code N; Bacterial surface proteins containing Ig-like domains
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25761; Mature: 25630
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPNPLAPVKGAGTTLWVYNGNGDPYANPLSDNDWSRLAKVKDLTPGELTAESYDDSYL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCC DDEDADWAATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVF CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAATGMTVTPASTSVVKGQSTT HHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEECCCCCEEEECCCEE LTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVSGNGEFAAVAE EEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEEEEEEECEEEEEEECCCCCEEEEEE INVTAS EEEEEC >Mature Secondary Structure PTPNPLAPVKGAGTTLWVYNGNGDPYANPLSDNDWSRLAKVKDLTPGELTAESYDDSYL CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEECCCCCCCCC DDEDADWAATGQGQKSAGDTSFTLAWMPGEQGQQALLAWFNEGDTRAYKIRFPNGTVDVF CCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCCHHHH RGWVSSIGKAVTAKEVITRTVKVTNVGRPSMAEDRSTVTAATGMTVTPASTSVVKGQSTT HHHHHHHCCHHHHHHHHHEEEEEEECCCCCCCCCCCEEEEECCCEECCCCCEEEECCCEE LTVAFQPEGATDKSFRAVSADKTKATVSVSGMTITVKGVAAGKVNIPVVSGNGEFAAVAE EEEEECCCCCCCCCEEEECCCCCEEEEEECCEEEEEEEEEECEEEEEEECCCCCEEEEEE INVTAS EEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA