Click here to switch to the map view.

The map label for this gene is yaeJ [H]

Identifier: 209397979

GI number: 209397979

Start: 218158

End: 218568

Strand: Direct

Name: yaeJ [H]

Synonym: ECH74115_0202

Alternate gene names: 209397979

Gene position: 218158-218568 (Clockwise)

Preceding gene: 209397204

Following gene: 209398085

Centisome position: 3.92

GC content: 54.5

Gene sequence:

>411_bases
ATGATTGTGATTTCCCGACATGTTGCTATTCCCGATGGTGAGCTTGAGATCACCGCCATTCGTGCGCAGGGCGCGGGCGG
GCAGCATGTTAATAAGACCTCAACGGCCATTCATCTGCGTTTTGACATTCGGGCATCCAGCCTGCCAGAGTATTACAAAG
AGCGTCTGCTCGCCGCCAGCCATCATTTGATCAGCAGTGATGGCGTAATTGTCATTAAGGCACAGGAATACCGCAGTCAG
GAACTGAACCGCGAAGCGGCGCTGGCCCGGCTGGTGGCAGTGATTAAAGATTTAACAACAGAACAAAAAGCCCGACGACC
CACGCGGCCCACCCGTGCATCGAAAGAGCGCAGGCTGGCATCGAAAGCACAAAAATCAAGCGTGAAGGCGATGCGCAGCG
GTCGGGAATAA

Upstream 100 bases:

>100_bases
GTACCATGACGCTGCAGGCAACGATTCAGGATGGCGTGATCTGGTTATCGGATGATAAGAATAATCTGGAAGTGAACTTA
ACCGCCTGGCAACAACCTTC

Downstream 100 bases:

>100_bases
AAAGAAGGAATGGATGGTGAAAAAAGCGATAGTGACAGCGATGGCTGTAATCAGCCTCTTTACTCTGATGGGTTGTAATA
ATCGGGCCGAAGTCGATACG

Product: peptidyl-tRNA hydrolase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQ
ELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLASKAQKSSVKAMRSGRE

Sequences:

>Translated_136_residues
MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQ
ELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLASKAQKSSVKAMRSGRE
>Mature_136_residues
MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAASHHLISSDGVIVIKAQEYRSQ
ELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLASKAQKSSVKAMRSGRE

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=140, Percent_Identity=95, Blast_Score=260, Evalue=2e-71,
Organism=Drosophila melanogaster, GI19921098, Length=137, Percent_Identity=35.036496350365, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 15137; Mature: 15137

Theoretical pI: Translated: 11.20; Mature: 11.20

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAAS
CEEEECEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
HHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLA
HHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SKAQKSSVKAMRSGRE
HHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIVISRHVAIPDGELEITAIRAQGAGGQHVNKTSTAIHLRFDIRASSLPEYYKERLLAAS
CEEEECEEECCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
HHLISSDGVIVIKAQEYRSQELNREAALARLVAVIKDLTTEQKARRPTRPTRASKERRLA
HHEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
SKAQKSSVKAMRSGRE
HHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7635807; 9278503; 7635808 [H]