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The map label for this gene is yedN [H]

Identifier: 209397909

GI number: 209397909

Start: 2541349

End: 2542488

Strand: Reverse

Name: yedN [H]

Synonym: ECH74115_2708

Alternate gene names: 209397909

Gene position: 2542488-2541349 (Counterclockwise)

Preceding gene: 209399913

Following gene: 209397269

Centisome position: 45.63

GC content: 35.18

Gene sequence:

>1140_bases
ATGTTTCCATTAAATGATCTGTCGTTAAAAACTCAGTCGGTTCAATTAAATAAAATCACATCGAATACTGAGTCTACGAT
AAAACAACACGAGTTAGTATCTGATGATGCAATCATAAATGAATTATCAAGTGAGTTAGTCAGTTGTCTTGGAAATGATA
AGTTTACACCAGTTAGTGAAGACAGCAACTTACTGAATATGCTGTCTGAATTTAAGTTATTGAGAGAGCAATGTTTCAGG
TGGGGTAATTATACTCTATTGTTTGAAAATTATGGGGCTTATGATAAGACGGGATCTATCACGATAGAAAAAAGTCAGGG
GGAGGGGACTTTACCCATTCGGCATAAATTAGAGTTTATATCGACCAATATTGCAGAGTTGCTGGACAAGTTAACCAAAA
TTACAGATGCCAGGCTTTGCAAAGGTTTCAGTGACTGGGCTAGTTCAGTCAAAGAAGGCGCATCGAATGACTTGAAAGAA
AATGTGGATAGAGCATTGGTGAGAATGTTTAAATGTGTTAAGCTTCACAGTAATGAACTTAACTTATCAAGCCTTTCTTT
GGGTTCTGTGCCGCCTCTTCCTGAGTGGATTGAAATGCTTAGCCTTGTTTATAATGAACTTGATTCAATACAGGTGCCCG
AATCGTGCAAAGAATTAGAACTCGATTTCAATAACCTTACAGAATTTCCACAAGTACCTGATGGAATTACCCTGATCTCC
GTAAATAATAACCTGATATCGTATATTGACTCATTTCCGCCAAAGGCTAAGAAAATTTTTATTTGTCACAATAAGCTATC
GGAAATACCAGCACTACCAGACACCGCTAAGGTTTTTGATTGTAGTGAGAATAATATTAAAGAAATTAGATGGTTCCCCA
AAAATTTGAAAGAAGCGTATATTGAATATAATAAGATTGAGGTTATTCCTGCGATACCTGGCAATTTAAAATTACTTTGT
ATGAAATGTAATCCTATTAAAGAGGCATTTTTAATGCCATGGACCCTTACAGGGATTCGCTATGAAATATCGCAGCGAAA
ATATATTGTTATGAATCCCGCCGATTATGATAAATATTCCGATATGGTTAAAAAGCATGTAATAGATGGTGAGGAATTCA
TAATTAAATATTATATGTAA

Upstream 100 bases:

>100_bases
AATATACTGCGTTATAAAAATGAGCGATTTTTGATAGTGGCAATTTTATTGTGTTTTAGAATGCGCCCTGGGCAATATAA
TTTATTAAACAGGAGTGTAA

Downstream 100 bases:

>100_bases
TTAATTAGGCGTAATTGTGTCACTGGAATAGAGGTTTCTTGTGACGCATGTGGAAGGGGCGTCTATGGACAAGGCGTTTC
CTGTTGGTGATAAATAAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 379; Mature: 379

Protein sequence:

>379_residues
MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDSNLLNMLSEFKLLREQCFR
WGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKE
NVDRALVRMFKCVKLHSNELNLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLIS
VNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAYIEYNKIEVIPAIPGNLKLLC
MKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYSDMVKKHVIDGEEFIIKYYM

Sequences:

>Translated_379_residues
MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDSNLLNMLSEFKLLREQCFR
WGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKE
NVDRALVRMFKCVKLHSNELNLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLIS
VNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAYIEYNKIEVIPAIPGNLKLLC
MKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYSDMVKKHVIDGEEFIIKYYM
>Mature_379_residues
MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSEDSNLLNMLSEFKLLREQCFR
WGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFISTNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKE
NVDRALVRMFKCVKLHSNELNLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLIS
VNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAYIEYNKIEVIPAIPGNLKLLC
MKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYSDMVKKHVIDGEEFIIKYYM

Specific function: Unknown

COG id: COG4886

COG function: function code S; Leucine-rich repeat (LRR) protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To S.flexneri ipaH 7.8 and Y.pestis yopM [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43296; Mature: 43296

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSE
CCCCCCCCCEECEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DSNLLNMLSEFKLLREQCFRWGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFI
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
STNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKENVDRALVRMFKCVKLHSNEL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
NLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLIS
CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHCCCCCCCCCCEEEEE
VNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAY
ECCHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCCCEEECCCCCHHHHHCCHHHHHHHH
IEYNKIEVIPAIPGNLKLLCMKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYS
HHHCEEEEEECCCCCEEEEEEECCCHHHHHCCCEEECCEEEEECCCEEEEECCCCCHHHH
DMVKKHVIDGEEFIIKYYM
HHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MFPLNDLSLKTQSVQLNKITSNTESTIKQHELVSDDAIINELSSELVSCLGNDKFTPVSE
CCCCCCCCCEECEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
DSNLLNMLSEFKLLREQCFRWGNYTLLFENYGAYDKTGSITIEKSQGEGTLPIRHKLEFI
CHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEECCCCCCCCHHHHHHHH
STNIAELLDKLTKITDARLCKGFSDWASSVKEGASNDLKENVDRALVRMFKCVKLHSNEL
HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCC
NLSSLSLGSVPPLPEWIEMLSLVYNELDSIQVPESCKELELDFNNLTEFPQVPDGITLIS
CCCEECCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCHHHCCCCCCCCCCEEEEE
VNNNLISYIDSFPPKAKKIFICHNKLSEIPALPDTAKVFDCSENNIKEIRWFPKNLKEAY
ECCHHHHHHHCCCCCCCEEEEEECCHHHCCCCCCCCCEEECCCCCHHHHHCCHHHHHHHH
IEYNKIEVIPAIPGNLKLLCMKCNPIKEAFLMPWTLTGIRYEISQRKYIVMNPADYDKYS
HHHCEEEEEECCCCCEEEEEEECCCHHHHHCCCEEECCEEEEECCCEEEEECCCCCHHHH
DMVKKHVIDGEEFIIKYYM
HHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8371104; 9278503 [H]