| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397704
Identifier: 209397704
GI number: 209397704
Start: 3255072
End: 3255635
Strand: Reverse
Name: 209397704
Synonym: ECH74115_3510
Alternate gene names: NA
Gene position: 3255635-3255072 (Counterclockwise)
Preceding gene: 209395749
Following gene: 209397163
Centisome position: 58.43
GC content: 52.66
Gene sequence:
>564_bases ATGGCGGAACTGAGTGATTTTTTACCGTATGTCCGTCGTCATATCAGCGGTCCACTGAACATTATGATGACGGATGCTCT GTCAATGGCTGCCGTGGCATTCAGCCGCCAGTCGTTGGTGTGCCGTCGGGAGGTTACTGTTGTACCAGTAGCAGGAAAAG AAATCGTGCTTCCGTATGACAAAGATGATGAGGAGTGCGTTCATATCATCCGTATCTCTGACGATAATCATGAGCTTTTT GTCGGTCGGGATGTGGATATCAGCTCCGGACGCTCCCTGCGATTTGCCTGTTCTCCCGGTGAGGTGAGCGTGCTTTATGC CGTCGCTCCGAAAGCCGGACGCAGCCAGATACCGGATGAACTCCTCACATGGCCTGAAGAAGTGGCTGCGGGGGCACTTG AGCGGTTGTTCATGCAGACTGGTGTTTCATGGTCAGATCCGTTACGCGCACAGTATTTTTCTGTGCAGTTTTCTGAGGGG ATCCGTCGGGCATATCGTCATACACTGGCGACAAGCCCGTACTCTTCATACCGCAACCCTGTACGCAGGCAGAGGTTTTT CTGA
Upstream 100 bases:
>100_bases GAAGAGCTGGATATTCACAAAGACCCGAAAGAAACGGCTGAGGCATTCCGTATCCGGGTGCGTGAGGCATTTCGCCGTCG TGTTGCGGAGACTGAACAGC
Downstream 100 bases:
>100_bases TGACGACGATTACAGAAATCATCGGACGTGTGAATACACAACTGGTTGACCCGATGATGGTTCGCTGGCCCCTGCAGGAA TTGTGCGATTATTACAATGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MAELSDFLPYVRRHISGPLNIMMTDALSMAAVAFSRQSLVCRREVTVVPVAGKEIVLPYDKDDEECVHIIRISDDNHELF VGRDVDISSGRSLRFACSPGEVSVLYAVAPKAGRSQIPDELLTWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEG IRRAYRHTLATSPYSSYRNPVRRQRFF
Sequences:
>Translated_187_residues MAELSDFLPYVRRHISGPLNIMMTDALSMAAVAFSRQSLVCRREVTVVPVAGKEIVLPYDKDDEECVHIIRISDDNHELF VGRDVDISSGRSLRFACSPGEVSVLYAVAPKAGRSQIPDELLTWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEG IRRAYRHTLATSPYSSYRNPVRRQRFF >Mature_186_residues AELSDFLPYVRRHISGPLNIMMTDALSMAAVAFSRQSLVCRREVTVVPVAGKEIVLPYDKDDEECVHIIRISDDNHELFV GRDVDISSGRSLRFACSPGEVSVLYAVAPKAGRSQIPDELLTWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGI RRAYRHTLATSPYSSYRNPVRRQRFF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21130; Mature: 20999
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAELSDFLPYVRRHISGPLNIMMTDALSMAAVAFSRQSLVCRREVTVVPVAGKEIVLPYD CCCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHEECCEEEEEECCCEEEECCC KDDEECVHIIRISDDNHELFVGRDVDISSGRSLRFACSPGEVSVLYAVAPKAGRSQIPDE CCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHH LLTWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGIRRAYRHTLATSPYSSYRNP HHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHHHHHHHHHHHHHCCCCHHHHHCH VRRQRFF HHHHCCC >Mature Secondary Structure AELSDFLPYVRRHISGPLNIMMTDALSMAAVAFSRQSLVCRREVTVVPVAGKEIVLPYD CCHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHEECCEEEEEECCCEEEECCC KDDEECVHIIRISDDNHELFVGRDVDISSGRSLRFACSPGEVSVLYAVAPKAGRSQIPDE CCCCCEEEEEEEECCCCEEEEECCCCCCCCCEEEEEECCCCEEEEEEECCCCCCCCCCHH LLTWPEEVAAGALERLFMQTGVSWSDPLRAQYFSVQFSEGIRRAYRHTLATSPYSSYRNP HHCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHEEEHHHHHHHHHHHHHHCCCCHHHHHCH VRRQRFF HHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA