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The map label for this gene is ybcQ [C]

Identifier: 209397666

GI number: 209397666

Start: 3273029

End: 3273220

Strand: Reverse

Name: ybcQ [C]

Synonym: ECH74115_3538

Alternate gene names: 209397666

Gene position: 3273220-3273029 (Counterclockwise)

Preceding gene: 209397779

Following gene: 209396141

Centisome position: 58.74

GC content: 48.44

Gene sequence:

>192_bases
ATGGCGTTGGCACGGAAACATGGGTGCTCTGACACCTGTATAGGTAAACGCCTTCACAAAGCGGAGGGGATTGTTGAAGG
CATGCTGATGATGCTGGGAGTGAGGCTTGAGATGGATCGGTATGTTGAGCGTGAATTGCCGGGAGGGAGAACCTCTGTAT
TTTATCAGCGAAAAAATAGTTTACGATCGTAA

Upstream 100 bases:

>100_bases
TGATGCGATGGTGATATGCGGGTGCATAGCCCGCCTTTACCGGAACAATCGCGATCTGCATGACTTGCTGGTTGATTATT
ACGTGTTGGGGGAGACGTTC

Downstream 100 bases:

>100_bases
AAATCTGCATATCATGATAAGAGTGGTTACATTGCCACGCAGTCGAACCCGCCGATGCGCGGGTTTTTTTGTACCCCGAA
TCCTGTGAGCTATACGGAAA

Product: antitermination protein

Products: NA

Alternate protein names: Antitermination Protein Q Prophage; Antitermination Protein Q-Like Protein; Antitermination Protein Q

Number of amino acids: Translated: 63; Mature: 62

Protein sequence:

>63_residues
MALARKHGCSDTCIGKRLHKAEGIVEGMLMMLGVRLEMDRYVERELPGGRTSVFYQRKNSLRS

Sequences:

>Translated_63_residues
MALARKHGCSDTCIGKRLHKAEGIVEGMLMMLGVRLEMDRYVERELPGGRTSVFYQRKNSLRS
>Mature_62_residues
ALARKHGCSDTCIGKRLHKAEGIVEGMLMMLGVRLEMDRYVERELPGGRTSVFYQRKNSLRS

Specific function: Positively Regulate Expression Of Some Phage Genes. Bacterial Host RNA Polymerase Modified By Antitermination Proteins Transcribes Through Termination Sites That Otherwise Prevent Expression Of The Regulated Genes (By Similarity). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786763, Length=45, Percent_Identity=66.6666666666667, Blast_Score=60, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7184; Mature: 7052

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
7.9 %Met     (Translated Protein)
11.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
9.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALARKHGCSDTCIGKRLHKAEGIVEGMLMMLGVRLEMDRYVERELPGGRTSVFYQRKNS
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
LRS
CCC
>Mature Secondary Structure 
ALARKHGCSDTCIGKRLHKAEGIVEGMLMMLGVRLEMDRYVERELPGGRTSVFYQRKNS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
LRS
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA