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The map label for this gene is parA [H]

Identifier: 209397434

GI number: 209397434

Start: 3304867

End: 3305493

Strand: Direct

Name: parA [H]

Synonym: ECH74115_3590

Alternate gene names: 209397434

Gene position: 3304867-3305493 (Clockwise)

Preceding gene: 209397956

Following gene: 209399695

Centisome position: 59.31

GC content: 47.53

Gene sequence:

>627_bases
ATGAACGTTAGAATTTACTGCCGAGCATCAACTGAGGGGCAACACGCTGATCGAGCACTTACCAGCCTACGTGAATTTTC
AAAATCAAAAGGCTGGCAGATTGCAGGAGAGTATATAGAAAATGCTAGCGGGGCGAAGCTTGAGCGCGTAGAGCTTATGC
GGCTATTGTCTGAAGCCCAGTCCGGCGATCTGTTGCTAGTGGAAGCTATAGATCGTCTGAGTCGCCTAGAACATAGTGCA
TGGGTCGAACTGAAAGATACGCTCAACCGAAAAGGGTTAATCATCGTATCAATGGATTTACCAACGAGCTGGCAGATGGT
CGAGATGGCAGGCAATGATCTAACCAGCGGCATCCTGAGAGCCGTAAATGCCATGTTGATTGATATCCTTGCCACAATGG
CACGGCAGGATTACGAAACACGCCGTAAACGCCAACAGCAAGGCATTGAACGAGCTAAAAGCGAAGGCATATACATTGGG
AGGGCGAAAAATCAGGAAGCCCGAGAGATCGTTAGAGAGATGTTGGAGCAAGGAGTAAAACCTGAACTCATCATGAAGGC
AGCAGGAATCAGCCGAGCGACTTACTACCGGATAAAAAACGAGCTATTGATCGTAAAATCAGAATAA

Upstream 100 bases:

>100_bases
GATACAAAGTCTCAATAGGGTTGTATAGGAACATTTTGACTACACAAACTGCATTATGTATCATTTGCACTTATATTCAC
AACCCTTTTGAGACAATGCA

Downstream 100 bases:

>100_bases
AATTTGAAAGGTCGTCAGGCTTGTTTCATCAGGTAAAAACCAGCATTTCTGATCACAACGCTTGGGGGCACCTATTGGGG
CACTCACCAAAATCGAAAGA

Product: resolvase domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNVRIYCRASTEGQHADRALTSLREFSKSKGWQIAGEYIENASGAKLERVELMRLLSEAQSGDLLLVEAIDRLSRLEHSA
WVELKDTLNRKGLIIVSMDLPTSWQMVEMAGNDLTSGILRAVNAMLIDILATMARQDYETRRKRQQQGIERAKSEGIYIG
RAKNQEAREIVREMLEQGVKPELIMKAAGISRATYYRIKNELLIVKSE

Sequences:

>Translated_208_residues
MNVRIYCRASTEGQHADRALTSLREFSKSKGWQIAGEYIENASGAKLERVELMRLLSEAQSGDLLLVEAIDRLSRLEHSA
WVELKDTLNRKGLIIVSMDLPTSWQMVEMAGNDLTSGILRAVNAMLIDILATMARQDYETRRKRQQQGIERAKSEGIYIG
RAKNQEAREIVREMLEQGVKPELIMKAAGISRATYYRIKNELLIVKSE
>Mature_208_residues
MNVRIYCRASTEGQHADRALTSLREFSKSKGWQIAGEYIENASGAKLERVELMRLLSEAQSGDLLLVEAIDRLSRLEHSA
WVELKDTLNRKGLIIVSMDLPTSWQMVEMAGNDLTSGILRAVNAMLIDILATMARQDYETRRKRQQQGIERAKSEGIYIG
RAKNQEAREIVREMLEQGVKPELIMKAAGISRATYYRIKNELLIVKSE

Specific function: Involved in plasmid partition [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 23626; Mature: 23626

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: PS00397 RECOMBINASES_1 ; PS00398 RECOMBINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVRIYCRASTEGQHADRALTSLREFSKSKGWQIAGEYIENASGAKLERVELMRLLSEAQ
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCC
SGDLLLVEAIDRLSRLEHSAWVELKDTLNRKGLIIVSMDLPTSWQMVEMAGNDLTSGILR
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHH
AVNAMLIDILATMARQDYETRRKRQQQGIERAKSEGIYIGRAKNQEAREIVREMLEQGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCC
PELIMKAAGISRATYYRIKNELLIVKSE
HHHHHHHCCCCHHHHHEECCEEEEEECC
>Mature Secondary Structure
MNVRIYCRASTEGQHADRALTSLREFSKSKGWQIAGEYIENASGAKLERVELMRLLSEAQ
CCEEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEHHHHHCCCCCCHHHHHHHHHHHHHCC
SGDLLLVEAIDRLSRLEHSAWVELKDTLNRKGLIIVSMDLPTSWQMVEMAGNDLTSGILR
CCCEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHCCHHHHHHHH
AVNAMLIDILATMARQDYETRRKRQQQGIERAKSEGIYIGRAKNQEAREIVREMLEQGVK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHCCCC
PELIMKAAGISRATYYRIKNELLIVKSE
HHHHHHHCCCCHHHHHEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2172207 [H]