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The map label for this gene is nohA [H]

Identifier: 209397391

GI number: 209397391

Start: 1701328

End: 1701873

Strand: Direct

Name: nohA [H]

Synonym: ECH74115_1782

Alternate gene names: 209397391

Gene position: 1701328-1701873 (Clockwise)

Preceding gene: 209395869

Following gene: 209397875

Centisome position: 30.53

GC content: 50.55

Gene sequence:

>546_bases
ATGAAGGTTAATAAAAAGAAACTTGCCGAAATTTTCAACGTGGATCCGCGAACGATTGAACGCTGGCAGTCTCAGGGGCT
CCCTTGCGTCTCCGGAGGTGGTAAGGGCGTTGAATCTGTATTTGATACCGCCACGGCAATTCAGTGGTATGCGCAGAGGG
AAGCTGATATCGAAAATGAAAAACTCCGTAAAGAGGTTGAGGATTACAGGGCTGCCAGCGAGGCAGATCTCCAGCCTGGG
ACTATTGAGTACGAACGCCATCGACTTACGCGTGCGCAGGCTGACGCCCAGGAGCTGAAGAATGCCAGAGACTCCGCAGA
AGTGGTGGAAACCGCATTCTGTACTTTCGTGCTGTCACGGATCGCAGGTGAAATTGCCAGTATTCTTGACGGGATCCCTC
TCTCAGTACAGCGGCGTTTTCCGGAACTGGAAAACCGACATGTTGATTTCCTGAAACGGGATATTATCAAAGCCATGAAC
AAAGCAGCCGCGCTGGATGAACTGATACCGGGGTTGCTGAGTGAATATATCGAACAGTCAGATTGA

Upstream 100 bases:

>100_bases
TTCTAATATCGAATCCGTAAAGGTCCGACATGAAAACGCCTGAAAAAGTCATTTTCGGGCACTTTCATGTCGGACCCTGT
ATTTGTTGTGAGACTGTTTC

Downstream 100 bases:

>100_bases
TATTCTGCGGCGTGATGTACGCGCCGGGCTGCGAGCCCTGTTCAGGCCGGAGCCACAGACTGCCGTTGAATGGGCGGATG
CCAGTTACTATCTCCCGAAA

Product: terminase small subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKVNKKKLAEIFNVDPRTIERWQSQGLPCVSGGGKGVESVFDTATAIQWYAQREADIENEKLRKEVEDYRAASEADLQPG
TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN
KAAALDELIPGLLSEYIEQSD

Sequences:

>Translated_181_residues
MKVNKKKLAEIFNVDPRTIERWQSQGLPCVSGGGKGVESVFDTATAIQWYAQREADIENEKLRKEVEDYRAASEADLQPG
TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN
KAAALDELIPGLLSEYIEQSD
>Mature_181_residues
MKVNKKKLAEIFNVDPRTIERWQSQGLPCVSGGGKGVESVFDTATAIQWYAQREADIENEKLRKEVEDYRAASEADLQPG
TIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSRIAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMN
KAAALDELIPGLLSEYIEQSD

Specific function: Unknown

COG id: COG4220

COG function: function code L; Phage DNA packaging protein, Nu1 subunit of terminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To phage lambda DNA packaging protein NU1 [H]

Homologues:

Organism=Escherichia coli, GI1786773, Length=180, Percent_Identity=82.7777777777778, Blast_Score=310, Evalue=4e-86,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR010906
- InterPro:   IPR011991 [H]

Pfam domain/function: PF07471 Phage_Nu1 [H]

EC number: NA

Molecular weight: Translated: 20422; Mature: 20422

Theoretical pI: Translated: 4.77; Mature: 4.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVNKKKLAEIFNVDPRTIERWQSQGLPCVSGGGKGVESVFDTATAIQWYAQREADIENE
CCCCHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
KLRKEVEDYRAASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
D
C
>Mature Secondary Structure
MKVNKKKLAEIFNVDPRTIERWQSQGLPCVSGGGKGVESVFDTATAIQWYAQREADIENE
CCCCHHHHHHHHCCCHHHHHHHHHCCCCEECCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
KLRKEVEDYRAASEADLQPGTIEYERHRLTRAQADAQELKNARDSAEVVETAFCTFVLSR
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAGEIASILDGIPLSVQRRFPELENRHVDFLKRDIIKAMNKAAALDELIPGLLSEYIEQS
HHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
D
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503; 1630906 [H]