Click here to switch to the map view.

The map label for this gene is yecE

Identifier: 209397353

GI number: 209397353

Start: 2459619

End: 2460437

Strand: Direct

Name: yecE

Synonym: ECH74115_2604

Alternate gene names: 209397353

Gene position: 2459619-2460437 (Clockwise)

Preceding gene: 209396237

Following gene: 209396949

Centisome position: 44.14

GC content: 50.67

Gene sequence:

>819_bases
ATGATTTACATCGGTCTACCGCAATGGTCGCATCCTAAATGGGTGCGGTTGGGGATCACCAGCCTTGAAGAGTATGCCCG
TCACTTTAACTGCGTGGAGGGCAACACCACGCTTTACGCCCTGCCGAAACCCGAGGTTGTCCTGCGCTGGCGTGAACAGA
CCACAGATGACTTCCGCTTCTGTTTTAAGTTTCCGGCGACCATTTCGCATCAGGCAGCATTACGACATTGCGATGATTTA
GTGACTGAATTTTTGACCCGCATGTCACCGTTGGCTCCGCGCATTGGGCAATACTGGCTGCAACTGCCTGCCACATTCGG
CCCACGGGAGCTGCCTGCGCTTTGGCATTTTCTCGATTCTCTCCCTGGCGAATTTAATTATGGTGTGGAAGTCCGCCATC
CACAGTTTTTCGCCAAAGGGGAAGAGGAACAAACGCTTAATCGCGGTTTACATCAGCGCGGCGTTAATCAGGTGATTTTA
GACAGCCGCCCGGTTCATGCAGCACGTCCACACAGTGAAGCTATTCGCGACGCTCAACGAAAAAAACCTAAAGTTCCGGT
ACATGCTGTACTGACGGCGACAAATCCGCTGATCCGTTTTATCGGTAGTGATGATATGACGCAAAACCGGGAATTATTTC
AGGTCTGGTTACAAAAATTAGCGCAGTGGCATCAGACCACTACGCCTTATCTTTTTTTACATACGCCAGATATTGCCCAG
GCCCCGGAACTGGTACATACCCTGTGGGAAGACTTACGTAAAACGCTTCCAGAGATCGGAGCAGTTCCGGCTATTCCACA
GCAATCTTCTCTTTTCTGA

Upstream 100 bases:

>100_bases
CCTGTAGTGCCGCTAGCGCCGAGCAGCACAATAACAGTATCAACCATATCTACCCGCGCATCGCCCGTGTGCGTAGCGTG
GAAGAGATCCTCAACGCGTT

Downstream 100 bases:

>100_bases
ATTTGCCACCTATCATAGACAGGTGCCATCGGCCATTTTAAAGGGAGTTTGTATGGTAAGCGCGCTGTATGCCGTTTTAA
GTGCGTTGTTATTAATGAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDL
VTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNQVIL
DSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ
APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF

Sequences:

>Translated_272_residues
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDL
VTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNQVIL
DSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ
APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
>Mature_272_residues
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRFCFKFPATISHQAALRHCDDL
VTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDSLPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNQVIL
DSRPVHAARPHSEAIRDAQRKKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ
APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF

Specific function: Unknown

COG id: COG1801

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0759 family

Homologues:

Organism=Escherichia coli, GI1788175, Length=272, Percent_Identity=99.6323529411765, Blast_Score=561, Evalue=1e-161,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YECE_ECO57 (Q8XCI6)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   B90951
- PIR:   F85799
- RefSeq:   NP_288305.1
- RefSeq:   NP_310605.1
- ProteinModelPortal:   Q8XCI6
- EnsemblBacteria:   EBESCT00000026721
- EnsemblBacteria:   EBESCT00000059881
- GeneID:   913980
- GeneID:   961841
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2921
- KEGG:   ecs:ECs2578
- GeneTree:   EBGT00050000010140
- HOGENOM:   HBG298540
- OMA:   GCPSWSE
- ProtClustDB:   PRK10302
- BioCyc:   ECOL83334:ECS2578-MONOMER
- InterPro:   IPR002763
- Gene3D:   G3DSA:3.20.20.410

Pfam domain/function: PF01904 DUF72

EC number: NA

Molecular weight: Translated: 31451; Mature: 31451

Theoretical pI: Translated: 7.78; Mature: 7.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRF
CEEECCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCHHHHH
CFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNQVILDSRPVHAARPHSEAIRDAQR
CCCCCCCCEEECCCHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHH
KKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ
CCCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MIYIGLPQWSHPKWVRLGITSLEEYARHFNCVEGNTTLYALPKPEVVLRWREQTTDDFRF
CEEECCCCCCCCCEEEECHHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCCCCHHHHH
CFKFPATISHQAALRHCDDLVTEFLTRMSPLAPRIGQYWLQLPATFGPRELPALWHFLDS
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHH
LPGEFNYGVEVRHPQFFAKGEEEQTLNRGLHQRGVNQVILDSRPVHAARPHSEAIRDAQR
CCCCCCCCEEECCCHHHHCCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCHHHHHHHHHH
KKPKVPVHAVLTATNPLIRFIGSDDMTQNRELFQVWLQKLAQWHQTTTPYLFLHTPDIAQ
CCCCCCEEEEEECCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCHHH
APELVHTLWEDLRKTLPEIGAVPAIPQQSSLF
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796