| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is 209397328
Identifier: 209397328
GI number: 209397328
Start: 2093063
End: 2093596
Strand: Reverse
Name: 209397328
Synonym: ECH74115_2184
Alternate gene names: NA
Gene position: 2093596-2093063 (Counterclockwise)
Preceding gene: 209396654
Following gene: 209396297
Centisome position: 37.57
GC content: 62.17
Gene sequence:
>534_bases GTGGCAGATGTCTCCCCTGCGTCCATCACCCATGATGTGAAGGGCACGGCGTCAAGCGGTAATCCGGATGCGGATGCCGA GGCCGCGTTTGGCCAGTTTGTGACGGCAAATCTGCAGCCCACCGGTGCGGTCTGGCTGATGTCCAGCACGAATGCCCTGG CGCTGTCCATGCGTAAAAATGCGCTGGGGCAGAAGGAATATCCGGACATGACCCTGCTGGGCGGGACCTTCCAGGGGCTG CCGGTGATTGTCTCCCAGTATGTGGGTGACCAGCTGGTACTGGTGAATGCGCCGGATATTTATCTGGCGGATGACGGTGG TGTGGCGGTGGATATGTCCCGTGAAGCGTCACTGGAGATGCAGTCTGAACCGACCAGCGACAGCAGCACACCGTCACCGG TGGAGCTGGTCTCCATGTTCCAGACCGGCAGCGTGGCCATCCGTGCGGAGCGCTGGATCAACTGGCGTCGTCGCCGTACC GCGGCGGTGGCTGTGATCACCGGTGTGAACTACGGAACTGCGTCCGGCGGCTGA
Upstream 100 bases:
>100_bases GTGTTGATAACCTACAGAGGAAAACTACCGGGAATATGCGCTGGCGGAAGCGGTGGTGGCGCGTCTGGATACAGACTTTG TGGACCCGAAAAAAGCGGCG
Downstream 100 bases:
>100_bases GTCTGATGAGGAGGGCGGGAGGCGCTAGCTTCCCGCAGTAACTGATGGCAAAAATCCAGTATCTGCAGGGCACGCATGAT GCCCGGGCCGGGGATATCCG
Product: peptidase U35, phage prohead HK97
Products: NA
Alternate protein names: Head Protein/Prohead Protease; Peptidase U; Phage Head Maturation Protease; Phage Head Protein/Prohead Proteinase; Phage-Related Protein
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MADVSPASITHDVKGTASSGNPDADAEAAFGQFVTANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGTFQGL PVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPTSDSSTPSPVELVSMFQTGSVAIRAERWINWRRRRT AAVAVITGVNYGTASGG
Sequences:
>Translated_177_residues MADVSPASITHDVKGTASSGNPDADAEAAFGQFVTANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGTFQGL PVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPTSDSSTPSPVELVSMFQTGSVAIRAERWINWRRRRT AAVAVITGVNYGTASGG >Mature_176_residues ADVSPASITHDVKGTASSGNPDADAEAAFGQFVTANLQPTGAVWLMSSTNALALSMRKNALGQKEYPDMTLLGGTFQGLP VIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEMQSEPTSDSSTPSPVELVSMFQTGSVAIRAERWINWRRRRTA AVAVITGVNYGTASGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18569; Mature: 18438
Theoretical pI: Translated: 4.30; Mature: 4.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADVSPASITHDVKGTASSGNPDADAEAAFGQFVTANLQPTGAVWLMSSTNALALSMRKN CCCCCCCCEEECCCCCCCCCCCCCCCHHHCCCEEEECCCCCCEEEEEECCCEEEEEEHHH ALGQKEYPDMTLLGGTFQGLPVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEM HCCCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCEEEECCCCEEEEECCCCCEEE QSEPTSDSSTPSPVELVSMFQTGSVAIRAERWINWRRRRTAAVAVITGVNYGTASGG CCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCEEEEEEEEECCCCCCCCC >Mature Secondary Structure ADVSPASITHDVKGTASSGNPDADAEAAFGQFVTANLQPTGAVWLMSSTNALALSMRKN CCCCCCCEEECCCCCCCCCCCCCCCHHHCCCEEEECCCCCCEEEEEECCCEEEEEEHHH ALGQKEYPDMTLLGGTFQGLPVIVSQYVGDQLVLVNAPDIYLADDGGVAVDMSREASLEM HCCCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCEEEECCCCEEEEECCCCCEEE QSEPTSDSSTPSPVELVSMFQTGSVAIRAERWINWRRRRTAAVAVITGVNYGTASGG CCCCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHCEEEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA