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The map label for this gene is ynfA

Identifier: 209397241

GI number: 209397241

Start: 2161444

End: 2161770

Strand: Reverse

Name: ynfA

Synonym: ECH74115_2291

Alternate gene names: 209397241

Gene position: 2161770-2161444 (Counterclockwise)

Preceding gene: 209399497

Following gene: 209397970

Centisome position: 38.8

GC content: 51.68

Gene sequence:

>327_bases
ATGATTAAAACAACGTTACTATTTTTTGCTACTGCGCTGTGTGAAATTATTGGATGCTTTCTGCCCTGGTTGTGGTTAAA
ACGAAACGCCAGTATCTGGCTGTTGCTTCCGGCGGGGATTTCACTGGCGCTGTTTGTCTGGTTGTTAACGTTGCATCCTG
CGGCGAGTGGGCGTGTTTACGCGGCTTATGGTGGCGTTTATGTCTGCACGGCGTTGATGTGGCTGCGCGTTGTGGATGGC
GTGAAACTGACTCTTTATGACTGGACGGGGCCGTTGATTGCGCTTTGCGGCATGTTGATCATTGTTGTGGGCTGGGGGCG
CACGTAG

Upstream 100 bases:

>100_bases
CTACACCATCCACTGCGAACGCAAAACGTACCAGGAGGGTGTTTATATTGATGATATTATGTCGCCCTATAACTATACAT
GATGTCAATAAGTGACAAAG

Downstream 100 bases:

>100_bases
GAACATAAATCCATTTTATCAATAAGATACGAGGAAGTGTCAGCTGACAAAAGGTATTCTATTTCATCTTTTGTCAACCA
TTCACAGCGCAAATATACGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDG
VKLTLYDWTGPLIALCGMLIIVVGWGRT

Sequences:

>Translated_108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDG
VKLTLYDWTGPLIALCGMLIIVVGWGRT
>Mature_108_residues
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVYAAYGGVYVCTALMWLRVVDG
VKLTLYDWTGPLIALCGMLIIVVGWGRT

Specific function: Unknown

COG id: COG1742

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0060 family

Homologues:

Organism=Escherichia coli, GI1787865, Length=108, Percent_Identity=98.1481481481482, Blast_Score=206, Evalue=2e-55,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YNFA_ECO57 (Q8X7A6)

Other databases:

- EMBL:   AE005174
- EMBL:   BA000007
- PIR:   E85763
- PIR:   H90914
- RefSeq:   NP_288017.1
- RefSeq:   NP_310315.1
- EnsemblBacteria:   EBESCT00000024781
- EnsemblBacteria:   EBESCT00000056418
- GeneID:   914350
- GeneID:   961520
- GenomeReviews:   AE005174_GR
- GenomeReviews:   BA000007_GR
- KEGG:   ece:Z2569
- KEGG:   ecs:ECs2288
- GeneTree:   EBGT00050000011198
- HOGENOM:   HBG313568
- OMA:   TRWDVAG
- ProtClustDB:   PRK02237
- BioCyc:   ECOL83334:ECS2288-MONOMER
- HAMAP:   MF_00010
- InterPro:   IPR003844

Pfam domain/function: PF02694 UPF0060

EC number: NA

Molecular weight: Translated: 11974; Mature: 11974

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x1e80fe50)-; HASH(0x1ef50fec)-; HASH(0x2105cef4)-; HASH(0x20592d90)-;

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVCTALMWLRVVDGVKLTLYDWTGPLIALCGMLIIVVGWGRT
EECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure
MIKTTLLFFATALCEIIGCFLPWLWLKRNASIWLLLPAGISLALFVWLLTLHPAASGRVY
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCCCCEEE
AAYGGVYVCTALMWLRVVDGVKLTLYDWTGPLIALCGMLIIVVGWGRT
EECCHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796