| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is 209397216
Identifier: 209397216
GI number: 209397216
Start: 2679946
End: 2680662
Strand: Reverse
Name: 209397216
Synonym: ECH74115_2886
Alternate gene names: NA
Gene position: 2680662-2679946 (Counterclockwise)
Preceding gene: 209398245
Following gene: 209399274
Centisome position: 48.11
GC content: 53.0
Gene sequence:
>717_bases ATGTCTGCTTTGTATGAACGTTCACAGCTGACGCAGGTGATGATTTCATCTGCCCCGGCGACTGCTGAAACCATGGAGAA GGCGGAATATCTGCGCCTGGACTGCACCATCAAGGAAGTCCAGTTCACCGCCGGTCAGAAACAGGATATTGATGTGACCA CGCTCTGCTCCACAGAGCAGGAGAACATCAACGGTCTGGGGGCGTCGTCCGAGATTTCCATGTCGGGTAATTTTTATCTG AATCAGGCCCAGAACGCCCTGCGTGATGCCTATGACAATGACACGGTGTATGCGTTTAAGGTGCAGTTTCCGTCCGGTAA GGGCTTTAAGTTCCTGGCGGAAGTGCGTCAGCACACCTGGTCATCCGGTACCAACGGCGTGGTGGCTGCAACGTTTTCAC TTCGCCTGAAGGGTAAACCGGTGTCCTATGTGGTACCGCTGGCGTTTGTGAAAAATCTGGAGAAGACACTTACCGTGAAT ACCGGTGCGCTGCTGACAATGTCAGTCAGTGTCAACGGGGGAACGCCGCCTTATAAACACGCCTGGAAGAAGGATGGTCA GCCGGTAGAGGGACAGACTACTGACACTTTCAGTAAAGCCAATACGCAGTCAGGTGATAAGGGGGCTTATACCTGCGAGG TAACGGATTCTGCAGAACAGCCGCAGAGCATTACCTCTGATGCGTGTACAGTAACGGTTAATGGTGCGGGCGGATAA
Upstream 100 bases:
>100_bases CGCTGTTACCGTGCAACCCTGGAGTTTCAGGTCACGGTGTAATTTTTTCAACAGAACCCATAACCCGCCGCGTGCGGGTT TTTTATTATCAGGAGGCAGA
Downstream 100 bases:
>100_bases GGCTTATGGCAAAAGATCTGAAAACACTGGCGCTGGCCAGACTGTCGGGGTTCCGTCATAAAACGGTGAAGGTGCCGGAA TGGAGAAATGTCAGCGTGGT
Product: major tail protein
Products: NA
Alternate protein names: Tail Subunit
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MSALYERSQLTQVMISSAPATAETMEKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYL NQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNLEKTLTVN TGALLTMSVSVNGGTPPYKHAWKKDGQPVEGQTTDTFSKANTQSGDKGAYTCEVTDSAEQPQSITSDACTVTVNGAGG
Sequences:
>Translated_238_residues MSALYERSQLTQVMISSAPATAETMEKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYL NQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNLEKTLTVN TGALLTMSVSVNGGTPPYKHAWKKDGQPVEGQTTDTFSKANTQSGDKGAYTCEVTDSAEQPQSITSDACTVTVNGAGG >Mature_237_residues SALYERSQLTQVMISSAPATAETMEKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQENINGLGASSEISMSGNFYLN QAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTWSSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNLEKTLTVNT GALLTMSVSVNGGTPPYKHAWKKDGQPVEGQTTDTFSKANTQSGDKGAYTCEVTDSAEQPQSITSDACTVTVNGAGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25558; Mature: 25426
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS50835 IG_LIKE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSALYERSQLTQVMISSAPATAETMEKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQ CCCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCCCCEEEEEECCCC ENINGLGASSEISMSGNFYLNQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTW CCCCCCCCCCEEEECCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNLEKTLTVNTGALLTMSVSVNGGTPPYKH CCCCCCEEEEEEEEEECCCCCEEEHHHHHHHCCHHEEEEECCEEEEEEEEECCCCCCCCH AWKKDGQPVEGQTTDTFSKANTQSGDKGAYTCEVTDSAEQPQSITSDACTVTVNGAGG HHCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC >Mature Secondary Structure SALYERSQLTQVMISSAPATAETMEKAEYLRLDCTIKEVQFTAGQKQDIDVTTLCSTEQ CCHHHHHHHHHHHHHCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCCCCEEEEEECCCC ENINGLGASSEISMSGNFYLNQAQNALRDAYDNDTVYAFKVQFPSGKGFKFLAEVRQHTW CCCCCCCCCCEEEECCCEEEHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHC SSGTNGVVAATFSLRLKGKPVSYVVPLAFVKNLEKTLTVNTGALLTMSVSVNGGTPPYKH CCCCCCEEEEEEEEEECCCCCEEEHHHHHHHCCHHEEEEECCEEEEEEEEECCCCCCCCH AWKKDGQPVEGQTTDTFSKANTQSGDKGAYTCEVTDSAEQPQSITSDACTVTVNGAGG HHCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA