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The map label for this gene is yihM [H]

Identifier: 209396988

GI number: 209396988

Start: 4960079

End: 4961059

Strand: Direct

Name: yihM [H]

Synonym: ECH74115_5319

Alternate gene names: 209396988

Gene position: 4960079-4961059 (Clockwise)

Preceding gene: 209397414

Following gene: 209396239

Centisome position: 89.02

GC content: 43.53

Gene sequence:

>981_bases
ATGGTGACAATAAATAACGCAAGAAAGATTCTACAACGTGTCGACACTCTTCCTCTTTATTTACATGCTTATGCCTTTCA
TTTAAATATGCGGCTGGAAAGAGTGTTGCCTGCTGATTTACTTGATATCGCAAGTGAAAATAATCTACGTGGCGTCAAAA
TCCATGTTCTGGATGGCGAGCGTTTTTCTCTTGGTAATATGGACGATAAAGAACTCTCTGCCTTTGGGGATAAAGCCCGC
CGTCTGAACCTTGATATTCATATTGAAACCAGCGCCTCAGATAAGGCATCTATTGACGAAGCCGTCGCCATCGCGTTGAA
AACTGGGGCATCGTCCGTACGTTTTTATCCACGTTATGAAGGTAATTTGCGCGACGTATTATCGATCATCGCTAACGACA
TTGCCTATGTGCGGGAAGCGTATCAGGATAGCGGCCTGACTTTTACGATCGAACAGCATGAAGATTTAAAAAGTCATGAG
TTGGTGTCGCTGGTCAAAGAAAGTGAGATGGAGTCTCTTTCCTTACTGTTTGATTTTGCGAATATGATCAATGCAAATGA
GCATCCCATAGACGCCTTAAAAACGATGGCACCGCATATTACCCAGGTCCATATCAAAGATGCCTTGATCGTTAAAGAAC
AAGGTGGCCTGGGTCATAAAGCCTGTATTTCAGGTCAGGGAGATATGCCGTTCAAAGAGTTATTAACACACCTTATCTGC
CTCGGCGATGAAGAACCGCAGGTGACGGCATATGGCCTGGAAGAAGAGGTTGATTATTATGCTCCAGCGTTCCGCTTTGA
AGACGAAGATGATAATCCGTGGATCCCTTATCGCCAGATGAGTGAAACACCATTGCCAGAAAAGCATTTGCTGGATGAGC
GGTTACGTAAAGAAAAAGAAGATGCAATTAATCAGATAAATCATGTGCGTAACGTACTACAACAAATCAAACAAGAGGCG
AGCCATCTTCTGAACCACTAA

Upstream 100 bases:

>100_bases
GAAAAGCATCGCGCCGACCAGCAAGGCAATATTGTCCAGATAGATATTGAATATTGGCGATTTGAGGCCGTAGACCTCAT
CATTAATCTGTAGGTGTTTT

Downstream 100 bases:

>100_bases
CAAGTTTTAACTCATACGCAGTTAATAAAACCATTCCATAAGAATGGTCGGTATCTTATTGCCTTTAAAACAGTGATTTT
TAAAATCGCTTAGGGGATGT

Product: AP endonuclease, family 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 326; Mature: 326

Protein sequence:

>326_residues
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKAR
RLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVREAYQDSGLTFTIEQHEDLKSHE
LVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEQGGLGHKACISGQGDMPFKELLTHLIC
LGDEEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPEKHLLDERLRKEKEDAINQINHVRNVLQQIKQEA
SHLLNH

Sequences:

>Translated_326_residues
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKAR
RLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVREAYQDSGLTFTIEQHEDLKSHE
LVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEQGGLGHKACISGQGDMPFKELLTHLIC
LGDEEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPEKHLLDERLRKEKEDAINQINHVRNVLQQIKQEA
SHLLNH
>Mature_326_residues
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGERFSLGNMDDKELSAFGDKAR
RLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYEGNLRDVLSIIANDIAYVREAYQDSGLTFTIEQHEDLKSHE
LVSLVKESEMESLSLLFDFANMINANEHPIDALKTMAPHITQVHIKDALIVKEQGGLGHKACISGQGDMPFKELLTHLIC
LGDEEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPEKHLLDERLRKEKEDAINQINHVRNVLQQIKQEA
SHLLNH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790305, Length=326, Percent_Identity=97.8527607361963, Blast_Score=656, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 37060; Mature: 37060

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGE
CEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEECCC
RFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYE
EECCCCCCHHHHHHHCCHHHEEEEEEEEECCCCCCHHHHHHHHHHEECCCCCEEEECCCC
GNLRDVLSIIANDIAYVREAYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFA
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NMINANEHPIDALKTMAPHITQVHIKDALIVKEQGGLGHKACISGQGDMPFKELLTHLIC
HHCCCCCCCHHHHHHHCCCCEEEEEHHEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHH
LGDEEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPEKHLLDERLRKEKE
CCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DAINQINHVRNVLQQIKQEASHLLNH
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVTINNARKILQRVDTLPLYLHAYAFHLNMRLERVLPADLLDIASENNLRGVKIHVLDGE
CEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCEEEEEEECCC
RFSLGNMDDKELSAFGDKARRLNLDIHIETSASDKASIDEAVAIALKTGASSVRFYPRYE
EECCCCCCHHHHHHHCCHHHEEEEEEEEECCCCCCHHHHHHHHHHEECCCCCEEEECCCC
GNLRDVLSIIANDIAYVREAYQDSGLTFTIEQHEDLKSHELVSLVKESEMESLSLLFDFA
CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHH
NMINANEHPIDALKTMAPHITQVHIKDALIVKEQGGLGHKACISGQGDMPFKELLTHLIC
HHCCCCCCCHHHHHHHCCCCEEEEEHHEEEEECCCCCCCCEEECCCCCCCHHHHHHHHHH
LGDEEPQVTAYGLEEEVDYYAPAFRFEDEDDNPWIPYRQMSETPLPEKHLLDERLRKEKE
CCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
DAINQINHVRNVLQQIKQEASHLLNH
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503 [H]