| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is yfiL [H]
Identifier: 209396960
GI number: 209396960
Start: 3565588
End: 3565953
Strand: Direct
Name: yfiL [H]
Synonym: ECH74115_3841
Alternate gene names: 209396960
Gene position: 3565588-3565953 (Clockwise)
Preceding gene: 209399059
Following gene: 209397850
Centisome position: 63.99
GC content: 45.9
Gene sequence:
>366_bases ATGATGAAAAAGTTTATCGCCCCCTTGTTGGCTTTACTGGTTAGCGGATGCCAGATTGATCCTTATACTCACGCGCCAAC CTTGACCAGCACCGACTGGTATGATGTTGGTATGGAAGATGCGATATCGGGCAGCGCCATAAAAGATGACGATGCATTTA GCGATTCACAGGCGGATCGCGGTCTATACCTTAAAGGATATGCCGAAGGACAAAAGAAAACTTGCCAGACCGATTTTACT TATGCCCGAGGACTTTCCGGTAAAAGCTTTCCTGCCAGCTGCAACAATGTTGAAAATGCCAGCCAACTGCATGAAGTATG GCAAAAAGGGGCTGATGAAAATGCCAGCGCAATACGATTAAATTAA
Upstream 100 bases:
>100_bases ACATAAGCAATTTATTCGCGCTTTCAACCCTTGATTCTGTATAGATAAATTTACACCACCTTTGAAAACAATCCGCTATG CTTTGAAAAAGGAGAAAGAA
Downstream 100 bases:
>100_bases TTAAAACCCCACAAATAAATTAAACATAAGATTTTACTCATTATGTTTTATTTCTCACAATGATGACGACCGCATGAAAT AATGATATTTTAATGAGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: URF2 [H]
Number of amino acids: Translated: 121; Mature: 121
Protein sequence:
>121_residues MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFT YARGLSGKSFPASCNNVENASQLHEVWQKGADENASAIRLN
Sequences:
>Translated_121_residues MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFT YARGLSGKSFPASCNNVENASQLHEVWQKGADENASAIRLN >Mature_121_residues MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADRGLYLKGYAEGQKKTCQTDFT YARGLSGKSFPASCNNVENASQLHEVWQKGADENASAIRLN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082135, Length=121, Percent_Identity=99.1735537190083, Blast_Score=253, Evalue=3e-69,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021242 [H]
Pfam domain/function: PF10973 DUF2799 [H]
EC number: NA
Molecular weight: Translated: 13174; Mature: 13174
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC GLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKGADENASAIRL CEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEC N C >Mature Secondary Structure MMKKFIAPLLALLVSGCQIDPYTHAPTLTSTDWYDVGMEDAISGSAIKDDDAFSDSQADR CHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC GLYLKGYAEGQKKTCQTDFTYARGLSGKSFPASCNNVENASQLHEVWQKGADENASAIRL CEEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEC N C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6396419; 9205837; 9278503 [H]