| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is aegA [H]
Identifier: 209396864
GI number: 209396864
Start: 3403787
End: 3405766
Strand: Reverse
Name: aegA [H]
Synonym: ECH74115_3689
Alternate gene names: 209396864
Gene position: 3405766-3403787 (Counterclockwise)
Preceding gene: 209399161
Following gene: 209399744
Centisome position: 61.12
GC content: 55.66
Gene sequence:
>1980_bases ATGAATCGTTTTATTATGGCCAACAGTCAGCAATGTCTGGGTTGTCATGCTTGTGAAATCGCTTGTGTCATGGCTCACAA TGATGAGCAACATGTCCTGAGCCAACACCATTTTCATCCCCGAATTACGGTTATCAAACATCAGCAGCAACGTAGTGCAG TGACCTGTCACCATTGTGAAGATGCGCCCTGCGCCCGTAGCTGCCCTAATGGCGCAATCAGCCACGTTGATGACAGCATT CAGGTCAATCAGCAAAAGTGTATTGGCTGTAAATCCTGCGTGGTGGCCTGTCCGTTTGGTACGATGCAAATCGTCCTGAC ACCCGTCGCAGCGGGCAAAGTTAAAGCCACGGCGCATAAATGCGACCTTTGTGCAGGGCGCGAAAACGGTCCTGCCTGTG TCGAGAATTGCCCGGCGGACGCGCTGCAGCTGGTCACTGACGCCGCACTCTCAGGCATGGCGAAATCCCGCCGCTTGCGT ACCGCACGTCAGGAACATCAACCGTGGCATGCCAGTACCGCTGCACAAGAAATGCCGGTAATGAGTAAAGTCGAACAAAT GCAGGCAACGCCCGCGCGTGGCGAGCCGGATAAACTGGCGATTGAAGCGCGCAAAACCGGTTTTGATGAAATTTATCTGC CATTCCGTGCCGATCAGGCACAACGGGAAGCCTCGCGCTGCCTTAAATGCGGCGAGCACAGCGTTTGTGAATGGACCTGC CCGCTGCATAACCATATACCGCAGTGGATTGAACTGGTGAAAGCCGGAAACATCGACGCCGCCGTCGAGCTTTCTCACCT GACCAACACCCTGCCGGAAATTACCGGACGCGTTTGTCCGCAAGACCGTTTGTGTGAAGGTGCCTGTACTATTCGCGATG AGCACGGTGCGGTAACTATCGGCAACATTGAACGCTACATTTCAGATCAGGCGTTGGCGAAAGGTTGGCGTCCTGACTTA AGCCATGTCACCAAAGTGGACAAGCGGGTGGCGATTATCGGTGCAGGTCCGGCAGGGCTGGCCTGTGCGGATGTTCTGAT CCGCAATGGCGTGGCGGTGACGGTGTACGATCGCCATCCAGAAATCGGTGGCTTGCTCACTTTCGGCATTCCTTCTTTCA AACTGGATAAATCCCTGCTGGCACGTCGTCGGGAAATCTTCAGCGCGATGGGGATTCACTTCGAACTCAATTGTGAAGTG GGTAAAGATGTCTCTTTGGATTCGCTTTTGGAACAATACGACGCGGTCTTCGTTGGCGTAGGCACTTACCGTTCCATGAA AGCGGGTTTACCCAATGAAGATGCGCCGGGCGTTTATGACGCGCTGCCGTTCCTCATCGCCAACACTAAACAGGTGATGG GGCTCGAAGAGCTACCGGAAGAGCCGTTTATCAATACCGCCGGACTTAACGTCGTGGTACTGGGCGGCGGCGACACCGCG ATGGACTGTGTGCGTACTGCGCTGCGCCACGGCGCGAGTAACGTCACCTGCGCTTATCGTCGTGATGAAGCTAACATGCC AGGCTCGAAGAAAGAGGTGAAGAACGCCCGCGAAGAGGGGGCCAACTTCGAATTTAACGTCCAGCCGGTGGCGCTTGAGC TGAATGAACAAGGTCACGTCTGCGGGATTCGTTTCCTGCGCACGCGTCTTGGCGAGCCGGATGCCCAGGGGCGTCGGCGT CCAGTGCCGGTGGAAGGCAGTGAATTTGTCATGCCAGCCGACGCGGTGATTATGGCGTTTGGCTTCAATCCGCACGGGAT GCCGTGGCTGGAGTCGCACGGTGTAACGGTAGACAAATGGGGCCGCATCATCGCGGATGTGGAAAGCCAGTACCGTTACC AGACCACCAATCCGAAAATCTTCGCCGGTGGCGACGCCGTGCGTGGTGCGGATCTGGTGGTTACCGCAATGGCAGAAGGA CGTCATGCGGCACAGGGGATTATTGACTGGCTGGGGGTAAAATCAGTCAAATCTCACTGA
Upstream 100 bases:
>100_bases TTATTCTGGGCACATGAACATTGCCGATTCCCCTGTAAGTCGGGTAATAACAACACTCATATAAAGAATAAGGTTTTTAC AACCAAAAAAGAAGGTCGTT
Downstream 100 bases:
>100_bases TAGCCTGCGCAGACAAACCCGACTTCACAGCGTAATATAATTGTTCATTTCGCGCTGTGGAGTCGGTATGACGCAACAAA TCACCCTCATTAAAGACAAA
Product: putative oxidoreductase Fe-S binding subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 659; Mature: 659
Protein sequence:
>659_residues MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSI QVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDAALSGMAKSRRLR TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC PLHNHIPQWIELVKAGNIDAAVELSHLTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDL SHVTKVDKRVAIIGAGPAGLACADVLIRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEV GKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRR PVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEG RHAAQGIIDWLGVKSVKSH
Sequences:
>Translated_659_residues MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSI QVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDAALSGMAKSRRLR TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC PLHNHIPQWIELVKAGNIDAAVELSHLTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDL SHVTKVDKRVAIIGAGPAGLACADVLIRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEV GKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRR PVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEG RHAAQGIIDWLGVKSVKSH >Mature_659_residues MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCEDAPCARSCPNGAISHVDDSI QVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHKCDLCAGRENGPACVENCPADALQLVTDAALSGMAKSRRLR TARQEHQPWHASTAAQEMPVMSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC PLHNHIPQWIELVKAGNIDAAVELSHLTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTIGNIERYISDQALAKGWRPDL SHVTKVDKRVAIIGAGPAGLACADVLIRNGVAVTVYDRHPEIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEV GKDVSLDSLLEQYDAVFVGVGTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHVCGIRFLRTRLGEPDAQGRRR PVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKWGRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEG RHAAQGIIDWLGVKSVKSH
Specific function: Unknown
COG id: COG0493
COG function: function code ER; NADPH-dependent glutamate synthase beta chain and related oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 4 4Fe-4S ferredoxin-type domains [H]
Homologues:
Organism=Homo sapiens, GI119943098, Length=493, Percent_Identity=29.2089249492901, Blast_Score=162, Evalue=7e-40, Organism=Escherichia coli, GI1788811, Length=659, Percent_Identity=99.3930197268589, Blast_Score=1361, Evalue=0.0, Organism=Escherichia coli, GI87082180, Length=656, Percent_Identity=54.4207317073171, Blast_Score=729, Evalue=0.0, Organism=Escherichia coli, GI1789606, Length=461, Percent_Identity=66.3774403470716, Blast_Score=647, Evalue=0.0, Organism=Escherichia coli, GI1788468, Length=449, Percent_Identity=31.8485523385301, Blast_Score=191, Evalue=1e-49, Organism=Escherichia coli, GI1789067, Length=172, Percent_Identity=48.8372093023256, Blast_Score=158, Evalue=1e-39, Organism=Escherichia coli, GI1789243, Length=433, Percent_Identity=33.256351039261, Blast_Score=153, Evalue=3e-38, Organism=Escherichia coli, GI2367245, Length=147, Percent_Identity=52.3809523809524, Blast_Score=145, Evalue=1e-35, Organism=Escherichia coli, GI87082179, Length=166, Percent_Identity=44.578313253012, Blast_Score=141, Evalue=1e-34, Organism=Escherichia coli, GI1789079, Length=185, Percent_Identity=38.3783783783784, Blast_Score=129, Evalue=5e-31, Organism=Escherichia coli, GI87082114, Length=188, Percent_Identity=37.7659574468085, Blast_Score=115, Evalue=1e-26, Organism=Escherichia coli, GI1787122, Length=158, Percent_Identity=31.6455696202532, Blast_Score=73, Evalue=6e-14, Organism=Escherichia coli, GI2367345, Length=161, Percent_Identity=33.5403726708075, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1787872, Length=153, Percent_Identity=30.0653594771242, Blast_Score=69, Evalue=8e-13, Organism=Escherichia coli, GI1787749, Length=185, Percent_Identity=25.9459459459459, Blast_Score=67, Evalue=4e-12, Organism=Escherichia coli, GI1790326, Length=168, Percent_Identity=24.4047619047619, Blast_Score=65, Evalue=2e-11, Organism=Escherichia coli, GI226510944, Length=148, Percent_Identity=33.7837837837838, Blast_Score=64, Evalue=3e-11, Organism=Caenorhabditis elegans, GI17570289, Length=480, Percent_Identity=33.3333333333333, Blast_Score=207, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71984108, Length=446, Percent_Identity=32.5112107623318, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17543860, Length=161, Percent_Identity=30.4347826086957, Blast_Score=80, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6320030, Length=469, Percent_Identity=33.0490405117271, Blast_Score=219, Evalue=1e-57, Organism=Drosophila melanogaster, GI28574881, Length=471, Percent_Identity=36.0934182590234, Blast_Score=258, Evalue=1e-68, Organism=Drosophila melanogaster, GI24665539, Length=471, Percent_Identity=36.0934182590234, Blast_Score=258, Evalue=1e-68, Organism=Drosophila melanogaster, GI24665547, Length=471, Percent_Identity=36.0934182590234, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24665543, Length=471, Percent_Identity=36.0934182590234, Blast_Score=257, Evalue=2e-68, Organism=Drosophila melanogaster, GI24640763, Length=440, Percent_Identity=28.8636363636364, Blast_Score=149, Evalue=6e-36, Organism=Drosophila melanogaster, GI18858217, Length=440, Percent_Identity=28.8636363636364, Blast_Score=149, Evalue=6e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001450 - InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR013027 - InterPro: IPR012285 - InterPro: IPR006006 [H]
Pfam domain/function: PF00037 Fer4; PF07992 Pyr_redox_2 [H]
EC number: NA
Molecular weight: Translated: 71828; Mature: 71828
Theoretical pI: Translated: 6.77; Mature: 6.77
Prosite motif: PS00028 ZINC_FINGER_C2H2_1 ; PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCE CCCEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEEEEEEHHHCCCEEEECCC DAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHK CCCCHHCCCCCCHHHCCCCCEECHHHHCCCCHHEEECCCCCEEEEEEECCCCCEEECHHH CDLCAGRENGPACVENCPADALQLVTDAALSGMAKSRRLRTARQEHQPWHASTAAQEMPV HHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHH MSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC HHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEC PLHNHIPQWIELVKAGNIDAAVELSHLTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTI CHHHCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCEEEE GNIERYISDQALAKGWRPDLSHVTKVDKRVAIIGAGPAGLACADVLIRNGVAVTVYDRHP CCHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCC EIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGV CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCEEEEEC GTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA CCHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCCHHHCCCCCCEECCCCEEEEECCCCHH MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHV HHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCC CGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKW HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHCCCCCHHHH GRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH HHHHHHHHHHCEEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHCCC >Mature Secondary Structure MNRFIMANSQQCLGCHACEIACVMAHNDEQHVLSQHHFHPRITVIKHQQQRSAVTCHHCE CCCEEECCCCCCCCCCCEEEEEEEECCCHHHHHHHCCCCCEEEEEEEHHHCCCEEEECCC DAPCARSCPNGAISHVDDSIQVNQQKCIGCKSCVVACPFGTMQIVLTPVAAGKVKATAHK CCCCHHCCCCCCHHHCCCCCEECHHHHCCCCHHEEECCCCCEEEEEEECCCCCEEECHHH CDLCAGRENGPACVENCPADALQLVTDAALSGMAKSRRLRTARQEHQPWHASTAAQEMPV HHHCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCHH MSKVEQMQATPARGEPDKLAIEARKTGFDEIYLPFRADQAQREASRCLKCGEHSVCEWTC HHHHHHHHCCCCCCCCCCEEEEECCCCCCEEEEEECCCHHHHHHHHHHHCCCCCCEEEEC PLHNHIPQWIELVKAGNIDAAVELSHLTNTLPEITGRVCPQDRLCEGACTIRDEHGAVTI CHHHCCHHHHHHHHCCCCCCEEEHHHHHHHHHHHHCCCCCHHHHCCCCCEEEECCCEEEE GNIERYISDQALAKGWRPDLSHVTKVDKRVAIIGAGPAGLACADVLIRNGVAVTVYDRHP CCHHHHHHHHHHHCCCCCCHHHHHHHCCEEEEEECCCCHHHHHHHHHHCCCEEEEEECCC EIGGLLTFGIPSFKLDKSLLARRREIFSAMGIHFELNCEVGKDVSLDSLLEQYDAVFVGV CCCCEEEECCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHCEEEEEC GTYRSMKAGLPNEDAPGVYDALPFLIANTKQVMGLEELPEEPFINTAGLNVVVLGGGDTA CCHHHHHCCCCCCCCCCHHHHHHHHHCCCHHHCCHHHCCCCCCEECCCCEEEEECCCCHH MDCVRTALRHGASNVTCAYRRDEANMPGSKKEVKNAREEGANFEFNVQPVALELNEQGHV HHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEEECCCCCC CGIRFLRTRLGEPDAQGRRRPVPVEGSEFVMPADAVIMAFGFNPHGMPWLESHGVTVDKW HHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCCCCCHHCCCCCHHHH GRIIADVESQYRYQTTNPKIFAGGDAVRGADLVVTAMAEGRHAAQGIIDWLGVKSVKSH HHHHHHHHHHCEEECCCCEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8955321; 9205837; 9278503 [H]