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The map label for this gene is yohD [H]

Identifier: 209396851

GI number: 209396851

Start: 2996077

End: 2996655

Strand: Direct

Name: yohD [H]

Synonym: ECH74115_3263

Alternate gene names: 209396851

Gene position: 2996077-2996655 (Clockwise)

Preceding gene: 209400328

Following gene: 209398611

Centisome position: 53.77

GC content: 53.54

Gene sequence:

>579_bases
ATGGATCTCAATACACTCATCTCACAATATGGTTATGCCGCGCTGGTTATCGGTAGCCTGGCGGAAGGTGAAACCGTGAC
TTTGCTGGGAGGCCTTGCGGCACATCAGGGGCTATTAAAGTTCCCGCTGGTGGTACTTTCTGTAGCGCTTGGCGGCATGA
TTGGCGACCAGGTGCTCTATCTGTGCGGGCGGCGGTTTGGCGGTAAGCTGTTACGCCGTTTCTCTAAACATCAGGATAAA
ATTGAGCGGGCGCAGAAACTGATCCAACGCCATCCGTATCTGTTTGTCATTGGTACGCGCTTTATGTATGGCTTTCGGGT
GATTGGCCCGACGCTGATTGGTGCCAGCCAGCTGCCGCCGAAAATCTTTCTGCCGCTTAATATTCTCGGCGCATTTGCCT
GGGCGTTGATTTTTACCACTATCGGTTACGCTGGTGGTCAGGTGATTGCGCCGTGGTTGCACAATCTCGACCAGCATTTG
AAGCACTGGGTCTGGTTGATTCTGGTCGTGGTTCTGGTGGTAGGCGTGCGCTGGTGGCTGAAACGACGCGGGAAGAAAAA
GCCGGATAATCAGGCGTAA

Upstream 100 bases:

>100_bases
TCGCCCATGTAATTTGCACCGTCTGATGTACGTCCTTTTTCAGCGTGAATGATTCACAGGGTGTATGCTTACAGGCAACC
AAAGGGAGACAGACTGGCCT

Downstream 100 bases:

>100_bases
AACCATTGCCCTGGATAAGGCGTGCGCGCCGCATCCGACATCCGGTTCACCATGCCTGATGCGGCGCTTGTGCGTCTTAT
CATGCCTACCAAAATTTTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MDLNTLISQYGYAALVIGSLAEGETVTLLGGLAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDK
IERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
KHWVWLILVVVLVVGVRWWLKRRGKKKPDNQA

Sequences:

>Translated_192_residues
MDLNTLISQYGYAALVIGSLAEGETVTLLGGLAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDK
IERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
KHWVWLILVVVLVVGVRWWLKRRGKKKPDNQA
>Mature_192_residues
MDLNTLISQYGYAALVIGSLAEGETVTLLGGLAAHQGLLKFPLVVLSVALGGMIGDQVLYLCGRRFGGKLLRRFSKHQDK
IERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPPKIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHL
KHWVWLILVVVLVVGVRWWLKRRGKKKPDNQA

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI87082056, Length=192, Percent_Identity=98.9583333333333, Blast_Score=380, Evalue=1e-107,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 21436; Mature: 21436

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDLNTLISQYGYAALVIGSLAEGETVTLLGGLAAHQGLLKFPLVVLSVALGGMIGDQVLY
CCHHHHHHHHCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCC
KIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWL
EEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRRGKKKPDNQA
HHCCCCCCCCCC
>Mature Secondary Structure
MDLNTLISQYGYAALVIGSLAEGETVTLLGGLAAHQGLLKFPLVVLSVALGGMIGDQVLY
CCHHHHHHHHCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LCGRRFGGKLLRRFSKHQDKIERAQKLIQRHPYLFVIGTRFMYGFRVIGPTLIGASQLPP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHCCCCCCC
KIFLPLNILGAFAWALIFTTIGYAGGQVIAPWLHNLDQHLKHWVWLILVVVLVVGVRWWL
EEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KRRGKKKPDNQA
HHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]