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The map label for this gene is stfR [H]

Identifier: 209396826

GI number: 209396826

Start: 2666162

End: 2667475

Strand: Reverse

Name: stfR [H]

Synonym: ECH74115_2871

Alternate gene names: 209396826

Gene position: 2667475-2666162 (Counterclockwise)

Preceding gene: 209396273

Following gene: 209397490

Centisome position: 47.87

GC content: 60.27

Gene sequence:

>1314_bases
ATGGCAGTAAAGATTTCAGGTGTACTGAAAGACGGCACAGGAAAACCGGTAGAGAACTGCACCATTCAACTGAAAGCCAG
ACGGACCAGCAGCACGGTGGTGGTGAACACGGTGGCCTCTGAAAATCCGGATGAAGCCGGTCGTTACAGCATGGACGTTG
AGTACGGTCAGTACAGCGTCATTCTGTTGGTGGAGGGCTTCCCGCCGTCACATGCCGGGACCATCACCGTGTATGAAGAT
TCTCAACCGGGGACGCTGAATGATTTTCTCGGTGCCATGTCGGAGGATGACGTCCGGCCGGAGGCACTGCGTCGTTTTGA
ACTGATGGTGGAAGAAGCGGCGCGTCACGCTGAGGAGGCGAAGAAGAATGCCGGAGAGGCGGAGACGTCCGCGAGGAATG
CCGGCATATCAGCCAGTCAGGCAGAAGAGAGCGCGGCAAATGCTGACACTTCAGCAGGGGATGCATCGGAGTCAGCCCGG
CAGGCGGCAGAAAGTGCAGCCGCTGCAAAGCAGTCAGAGGAGGCGTCCTCGTCCTCGGCCTCTGCGGCCGCTCAAAAAGC
CAGTGAGTCATTACAAAGTGCAACAGATGCTGAGTTGTCAAAAAAGACGGCAGAAAGTGCAGCCGGTAATGCAGCCAGGG
ATGCAACGACCGCAGCAGAAAAAGCCCGGGAGTCAGCAGAAAGCGCACAGTCAGCGGAACAAAGCAGGATAGCGGCGGAA
GAAGCCGTAAACCGAATCCCCACCGTGGTGGGGCCTCCCGGGCCAAAGGGGGAACCGGGGCCCGCGGGTCCTCAGGGGCC
GAAGGGAGATAAAGGAGAGCGTGGAGACACCGGCCCGGCAGGGGCAACCGGCGAACGGGGACCGGCAGGTGATGCTGGTC
CGGCAGGCCCGCAGGGGCCGAAAGGTGACAGGGGAGAGCGGGGAGAGACCGGTCTGACGGGAAATGCAGGTCCACAGGGT
CCAAAGGGAGATACCGGTGCGGCAGGCCCGGCAGGCCCACAGGGACCGAAAGGAGAAACAGGTGCGGCTGGCCCGGTGGG
GGCAACCGGACCTCAGGGGCCGAAGGGCGACCCGGGGGAGACGCAAATACGGTTCCGTCTGGGGCCGGGAAACATTATTG
AGACAAACAGCAATGGCTGGTTCCCGGATACAGATGGTGCGCTCATCACCGGACTGACCTTTCTTGACCCCAAAGATACC
ACACAGGTTCAGGGGCTGTTTCGGCATTTGCAGGTCAGGTTTGGTGACGGGCCGTGGCAGGATGTTAAGGGGCTGAATGA
AGTGGGCAGTGATACAGGCAGAACAGGAGAATGA

Upstream 100 bases:

>100_bases
GACGGTTTCATCGTGGGTGTCGGTTATAAGTTCTGATTAGCCAGGTAACACAGTGTTATGACAGCCCGCCGGTTCAGGCG
GGCTTTTTTGTGGGGTGAAT

Downstream 100 bases:

>100_bases
CATGAATATACTAAAAAAACTTATGCAGCGTCTGTGTGGTTGCGGAAAGCATGATGGCCGTGAACACGTGCAGTCGCTTA
CAGCACAACTGCGACTGGGG

Product: tail fiber protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
QAAESAAAAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQG
PKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLDPKDT
TQVQGLFRHLQVRFGDGPWQDVKGLNEVGSDTGRTGE

Sequences:

>Translated_437_residues
MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYED
SQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESAR
QAAESAAAAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQG
PKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLDPKDT
TQVQGLFRHLQVRFGDGPWQDVKGLNEVGSDTGRTGE
>Mature_436_residues
AVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSVILLVEGFPPSHAGTITVYEDS
QPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEAKKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQ
AAESAAAAKQSEEASSSSASAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAEE
AVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGPKGDRGERGETGLTGNAGPQGP
KGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGETQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLDPKDTT
QVQGLFRHLQVRFGDGPWQDVKGLNEVGSDTGRTGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tail fiber family [H]

Homologues:

Organism=Homo sapiens, GI56847616, Length=103, Percent_Identity=51.4563106796116, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI65301115, Length=103, Percent_Identity=51.4563106796116, Blast_Score=84, Evalue=3e-16,
Organism=Homo sapiens, GI5803080, Length=110, Percent_Identity=48.1818181818182, Blast_Score=79, Evalue=1e-14,
Organism=Homo sapiens, GI55743098, Length=112, Percent_Identity=46.4285714285714, Blast_Score=78, Evalue=2e-14,
Organism=Homo sapiens, GI115392133, Length=126, Percent_Identity=49.2063492063492, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI55743106, Length=112, Percent_Identity=46.4285714285714, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI240255535, Length=112, Percent_Identity=46.4285714285714, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI48762934, Length=130, Percent_Identity=48.4615384615385, Blast_Score=75, Evalue=2e-13,
Organism=Homo sapiens, GI115527062, Length=110, Percent_Identity=46.3636363636364, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI183583553, Length=119, Percent_Identity=39.4957983193277, Blast_Score=73, Evalue=6e-13,
Organism=Homo sapiens, GI115527066, Length=110, Percent_Identity=46.3636363636364, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI115527070, Length=88, Percent_Identity=51.1363636363636, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI98985806, Length=118, Percent_Identity=47.4576271186441, Blast_Score=70, Evalue=5e-12,
Organism=Homo sapiens, GI98985810, Length=118, Percent_Identity=47.4576271186441, Blast_Score=70, Evalue=6e-12,
Organism=Homo sapiens, GI299523257, Length=118, Percent_Identity=47.4576271186441, Blast_Score=69, Evalue=8e-12,
Organism=Homo sapiens, GI299523253, Length=118, Percent_Identity=47.4576271186441, Blast_Score=68, Evalue=2e-11,
Organism=Escherichia coli, GI87081892, Length=123, Percent_Identity=88.6178861788618, Blast_Score=241, Evalue=7e-65,
Organism=Caenorhabditis elegans, GI17569903, Length=132, Percent_Identity=46.969696969697, Blast_Score=77, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17551704, Length=191, Percent_Identity=34.0314136125654, Blast_Score=68, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17535735, Length=118, Percent_Identity=47.4576271186441, Blast_Score=67, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008969
- InterPro:   IPR014766
- InterPro:   IPR011083
- InterPro:   IPR005003
- InterPro:   IPR013609 [H]

Pfam domain/function: PF07484 Collar; PF03335 Phage_fiber; PF08400 phage_tail_N [H]

EC number: NA

Molecular weight: Translated: 44141; Mature: 44010

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSV
CEEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAAAAKQSEEASSSSA
HHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLDPKDTTQVQGLFRHLQVRFGDGPWQ
EEEEEEECCCCEEEECCCCCCCCCCCCCEECEEEECCCCHHHHHHHHHHHEEEECCCCHH
DVKGLNEVGSDTGRTGE
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AVKISGVLKDGTGKPVENCTIQLKARRTSSTVVVNTVASENPDEAGRYSMDVEYGQYSV
EEEEEEEEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCCCCCEEEEEECCCEEE
ILLVEGFPPSHAGTITVYEDSQPGTLNDFLGAMSEDDVRPEALRRFELMVEEAARHAEEA
EEEEECCCCCCCCEEEEEECCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
KKNAGEAETSARNAGISASQAEESAANADTSAGDASESARQAAESAAAAKQSEEASSSSA
HHHCCCHHHHHHHCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
SAAAQKASESLQSATDAELSKKTAESAAGNAARDATTAAEKARESAESAQSAEQSRIAAE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAVNRIPTVVGPPGPKGEPGPAGPQGPKGDKGERGDTGPAGATGERGPAGDAGPAGPQGP
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
KGDRGERGETGLTGNAGPQGPKGDTGAAGPAGPQGPKGETGAAGPVGATGPQGPKGDPGE
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TQIRFRLGPGNIIETNSNGWFPDTDGALITGLTFLDPKDTTQVQGLFRHLQVRFGDGPWQ
EEEEEEECCCCEEEECCCCCCCCCCCCCEECEEEECCCCHHHHHHHHHHHEEEECCCCHH
DVKGLNEVGSDTGRTGE
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]