| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is leuO [H]
Identifier: 209396725
GI number: 209396725
Start: 88954
End: 89898
Strand: Direct
Name: leuO [H]
Synonym: ECH74115_0084
Alternate gene names: 209396725
Gene position: 88954-89898 (Clockwise)
Preceding gene: 209400291
Following gene: 209398207
Centisome position: 1.6
GC content: 45.82
Gene sequence:
>945_bases ATGCCAGAGGTACAAACAGATCATCCAGAGACGGCGGAGTTCAGCAAGCCACAGCTACGCATGGTCGATCTCAACTTATT AACCGTTTTCGATGCCGTGATGCAGGAGCAAAACATTACCCGTGCTGCTCATGTTCTGGGAATGTCGCAACCTGCGGTCA GTAACGCTGTTGCACGCCTGAAGGTGATGTTTAATGACGAGCTTTTTGTTCGTTATGGCCGTGGTATTCAACCGACTGCT CGCGCATTTCAACTTTTTGGTTCAGTTCGTCAGGCATTGCAACTAGTACAAAATGAATTGCCTGGTTCAGGTTTTGAACC CGCGAGCAGTGAACGTGTATTTCATCTTTGTGTTTGCAGCCCGTTAGACAGTATTCTGACCTCGCAGATTTATAATCACA TTGAGCAGATTGCGCCAAATATACATGTTATGTTCAAGTCTTCATTAAATCAGAACACTGAACATCAGCTGCGTTATCAG GAAACGGAGTTTGTGATTAGTTATGAAGACTTCCATCGTCCTGAATTTACCAGCGTGCCATTATTTAAAGATGAAATGGT GCTGGTAGCCAGCAAAAATCACCCAACAATTAAGGGCCCGTTACTGAAACATGATGTTTATAACGAACAACATGCGGCGG TTTCGCTCGATCGTTTCGCGTCATTTAGTCAACCTTGGTATGACACGGTAGATAAGCAAGCCAGTATCGCGTATCAGGGC ATGGCAATGATGAGCGTACTTAGCGTGGTGTCGCAAACGCATTTGGTCGCTATTGCGCCGCGTTGGCTGGCTGAAGAGTT CGCTGAATCCTTAGAATTACAGGTATTACCGCTGCCGTTAAAACTAAATAGCAGAACCTGTTATCTCTCCTGGCATGAAG CTGCCGGGCGTGATAAAGGCCATCAGTGGATGGAAGAGCAATTAGTCTCAATTTGCAAACGCTAA
Upstream 100 bases:
>100_bases CTTTTTCTTATTTTATATGCATGATAAATCATATTCTCGAGGATTATTTCTCTGCATTCCAATAAGGGAAAGGGAGTTAA GTGTGACAGTGGAGTTAAGT
Downstream 100 bases:
>100_bases CTGAATGCAGAATAGGTCAGACATGAATGTCTGGTTTATTCTGCATTTTTTATTGAGTGTAGAATTTTATTCTGAATGTG TGGGCTCTCTATTTTAGGAT
Product: leucine transcriptional activator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPEVQTDHPETAEFSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTA RAFQLFGSVRQALQLVQNELPGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQG MAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKLNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR
Sequences:
>Translated_314_residues MPEVQTDHPETAEFSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTA RAFQLFGSVRQALQLVQNELPGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQ ETEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQG MAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKLNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR >Mature_313_residues PEVQTDHPETAEFSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARLKVMFNDELFVRYGRGIQPTAR AFQLFGSVRQALQLVQNELPGSGFEPASSERVFHLCVCSPLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQE TEFVISYEDFHRPEFTSVPLFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQGM AMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKLNSRTCYLSWHEAAGRDKGHQWMEEQLVSICKR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]
Homologues:
Organism=Escherichia coli, GI87081684, Length=314, Percent_Identity=99.3630573248408, Blast_Score=651, Evalue=0.0, Organism=Escherichia coli, GI87081766, Length=285, Percent_Identity=26.6666666666667, Blast_Score=97, Evalue=2e-21, Organism=Escherichia coli, GI1786820, Length=286, Percent_Identity=24.8251748251748, Blast_Score=82, Evalue=4e-17, Organism=Escherichia coli, GI157672245, Length=295, Percent_Identity=23.0508474576271, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: 825 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000847 - InterPro: IPR005119 - InterPro: IPR011991 [H]
Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]
EC number: NA
Molecular weight: Translated: 35714; Mature: 35583
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: PS50931 HTH_LYSR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEVQTDHPETAEFSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARL CCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHH KVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPASSERVFHLCVCS HEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC PLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVP HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHEEECCEEEEEHHHCCCCCCCCCC LFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQG CCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKLNSRTCYLSWHEAAGRDKG HHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCEEEEEEEEEECCCEEEEEEHHHCCCCCH HQWMEEQLVSICKR HHHHHHHHHHHHCC >Mature Secondary Structure PEVQTDHPETAEFSKPQLRMVDLNLLTVFDAVMQEQNITRAAHVLGMSQPAVSNAVARL CCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHH KVMFNDELFVRYGRGIQPTARAFQLFGSVRQALQLVQNELPGSGFEPASSERVFHLCVCS HEEECCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEECC PLDSILTSQIYNHIEQIAPNIHVMFKSSLNQNTEHQLRYQETEFVISYEDFHRPEFTSVP HHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHEEECCEEEEEHHHCCCCCCCCCC LFKDEMVLVASKNHPTIKGPLLKHDVYNEQHAAVSLDRFASFSQPWYDTVDKQASIAYQG CCCCCEEEEECCCCCCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH MAMMSVLSVVSQTHLVAIAPRWLAEEFAESLELQVLPLPLKLNSRTCYLSWHEAAGRDKG HHHHHHHHHHHHHHEEEECHHHHHHHHHHHCCEEEEEEEEEECCCEEEEEEHHHCCCCCH HQWMEEQLVSICKR HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3413113; 1630901; 9278503; 3519576 [H]