Click here to switch to the map view.

The map label for this gene is arpB [H]

Identifier: 209396573

GI number: 209396573

Start: 3965754

End: 3967403

Strand: Direct

Name: arpB [H]

Synonym: ECH74115_4284

Alternate gene names: 209396573

Gene position: 3965754-3967403 (Clockwise)

Preceding gene: 209397595

Following gene: 209397731

Centisome position: 71.17

GC content: 31.39

Gene sequence:

>1650_bases
ATGCCAATAATAAACAAATCGGCATCAAATTATGTTGAATATATTTCAAAAAACAATCCCCCTTATTTATCAAAAAAGAG
AGATGCCAGTATAAATCTAAATGGAAAGGTTAGTGATTGCAATGGGGAAATCATATGGTGTCGACATATAGCATCATATT
GGAGTGAGTTTTTTTGTAGTAATTCAGGAAAGATAGACTACGAAACATTTTCATCCCCTCAATTATTAAGCAAAGCTATT
GTAATTCAGGAAAACAAGGGGACAAATAATATTAAGGGTGATGTGTATTTTGTTGAAAATGAATCTTGGGGAAGCGTTAT
ATATAACCTTTTTCTTCAACTTGAGAAAGAGAATAAATCTCACACATCATTAGAAGTTCATTCTCCCGGACATGCAATGG
CTCTGGGCATTAAAATAAAAAACGACAAGGAAAATAAGTTTGTTATTAATTTCTATGATCCCAATCAGACCGCGACGCAT
AAACGAGTATTTTTTTGCACTAATAACATTTGTGATATAATAAACCTGACAGCATATGATTTTCTTAGTGAGCAATGTCT
GAAATGTTATGGGCTAAAAGAAGACACACTGTCACTTTTTGTGGATAAAACAAAATCGAATGACAACAATAATGTGTTTA
TAAAAAAATTACCTGATAATATTCTCCAAGGTGTTGTTATTAATTTTGCTATGGGAGCAGGACTAAGAGAGATAATAAAA
AAGGTATATAACGATACTCGATTTACAGATCTTACAAAATCTCAGATGAAAATCTTGTGTGAATCAAAAAATGTTAATAA
TGTTCCTGGGTTGCTTTTAGCTCTACAAAATGGACATGATAATGTAATTGATGAATATGGTACTTTAATTAAAAAGTCAA
ATCTTAATAAAGAAGAATTAATACATATATTATCTGCAAGAACTTTGGATGGAACCATACCTGGTTTATATCAGGCCCTT
CAAAATGGACATGCTCAAGCTATTAAGAGTTATGGTAACTTAGTTCTGGATACTATTAATAAAAATATAGATTTAGAGTA
TTTGCTTTCAGCATTTAAATATGAGGCACATAGCTCTAATAAATATACTCCTGGATTATTTTCTGCATTTCAAAATGGTC
ATGCAGACGCAATAAAGGCATATTGTGGCGTACTTGGCAATAGTAATTTGAAAAGAGGTGAGATAATCAGGATGCTTGAG
GCGAGAAATTATGATGGTGCACCAGGATTACTTCTTGCGTATCAAAATGGAGATATTAATACGATTCAGTCTTTTTTTGA
CTCACTAATAATGTTAGATATATCAAAGGATTTTATCGAAGAGTTATTGACTGCAAAACATTATGATTTTACGGGGTTAT
CATTAGCGATCAGTCATAGACATGATCATGTTGTCAAATTATACGGAAAGTTATTTAAAAAACTTGATACCAGTCCATAT
AAAATGTCAATTATCCTAGCATTAGCAATTGATTGCGAGAGAAATAATGCAAACATAATTATTGATAGTGAGTACAAGTC
AAATAAGGCAGTAAAGGAATATGTAGAAATTTTAAAAGAATTCAATATATGCCCAGAAAAGGTAGCAGAATACCTAAGCG
AGTTCAGCGGAAAACATTTCCTCGATGTATATAATTATTATTCCAATTGA

Upstream 100 bases:

>100_bases
ACAACAGTAAAATTCTTCATAAATCGTTTAAACTACAAAAATCAGTAGAATATATTATTTCCACTGTCAGGCGGAAAATT
TATAGAAAGGATACAAACAT

Downstream 100 bases:

>100_bases
AAAAAATATAAAGTATCTATCACGGCACTCTCAGTTGAGTATCACAGGCACATGTATTTTAGCCCCCTGAGTCTACAGAC
AACCAATATTACTTAAATAA

Product: Ent protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 549; Mature: 548

Protein sequence:

>549_residues
MPIINKSASNYVEYISKNNPPYLSKKRDASINLNGKVSDCNGEIIWCRHIASYWSEFFCSNSGKIDYETFSSPQLLSKAI
VIQENKGTNNIKGDVYFVENESWGSVIYNLFLQLEKENKSHTSLEVHSPGHAMALGIKIKNDKENKFVINFYDPNQTATH
KRVFFCTNNICDIINLTAYDFLSEQCLKCYGLKEDTLSLFVDKTKSNDNNNVFIKKLPDNILQGVVINFAMGAGLREIIK
KVYNDTRFTDLTKSQMKILCESKNVNNVPGLLLALQNGHDNVIDEYGTLIKKSNLNKEELIHILSARTLDGTIPGLYQAL
QNGHAQAIKSYGNLVLDTINKNIDLEYLLSAFKYEAHSSNKYTPGLFSAFQNGHADAIKAYCGVLGNSNLKRGEIIRMLE
ARNYDGAPGLLLAYQNGDINTIQSFFDSLIMLDISKDFIEELLTAKHYDFTGLSLAISHRHDHVVKLYGKLFKKLDTSPY
KMSIILALAIDCERNNANIIIDSEYKSNKAVKEYVEILKEFNICPEKVAEYLSEFSGKHFLDVYNYYSN

Sequences:

>Translated_549_residues
MPIINKSASNYVEYISKNNPPYLSKKRDASINLNGKVSDCNGEIIWCRHIASYWSEFFCSNSGKIDYETFSSPQLLSKAI
VIQENKGTNNIKGDVYFVENESWGSVIYNLFLQLEKENKSHTSLEVHSPGHAMALGIKIKNDKENKFVINFYDPNQTATH
KRVFFCTNNICDIINLTAYDFLSEQCLKCYGLKEDTLSLFVDKTKSNDNNNVFIKKLPDNILQGVVINFAMGAGLREIIK
KVYNDTRFTDLTKSQMKILCESKNVNNVPGLLLALQNGHDNVIDEYGTLIKKSNLNKEELIHILSARTLDGTIPGLYQAL
QNGHAQAIKSYGNLVLDTINKNIDLEYLLSAFKYEAHSSNKYTPGLFSAFQNGHADAIKAYCGVLGNSNLKRGEIIRMLE
ARNYDGAPGLLLAYQNGDINTIQSFFDSLIMLDISKDFIEELLTAKHYDFTGLSLAISHRHDHVVKLYGKLFKKLDTSPY
KMSIILALAIDCERNNANIIIDSEYKSNKAVKEYVEILKEFNICPEKVAEYLSEFSGKHFLDVYNYYSN
>Mature_548_residues
PIINKSASNYVEYISKNNPPYLSKKRDASINLNGKVSDCNGEIIWCRHIASYWSEFFCSNSGKIDYETFSSPQLLSKAIV
IQENKGTNNIKGDVYFVENESWGSVIYNLFLQLEKENKSHTSLEVHSPGHAMALGIKIKNDKENKFVINFYDPNQTATHK
RVFFCTNNICDIINLTAYDFLSEQCLKCYGLKEDTLSLFVDKTKSNDNNNVFIKKLPDNILQGVVINFAMGAGLREIIKK
VYNDTRFTDLTKSQMKILCESKNVNNVPGLLLALQNGHDNVIDEYGTLIKKSNLNKEELIHILSARTLDGTIPGLYQALQ
NGHAQAIKSYGNLVLDTINKNIDLEYLLSAFKYEAHSSNKYTPGLFSAFQNGHADAIKAYCGVLGNSNLKRGEIIRMLEA
RNYDGAPGLLLAYQNGDINTIQSFFDSLIMLDISKDFIEELLTAKHYDFTGLSLAISHRHDHVVKLYGKLFKKLDTSPYK
MSIILALAIDCERNNANIIIDSEYKSNKAVKEYVEILKEFNICPEKVAEYLSEFSGKHFLDVYNYYSN

Specific function: Unknown

COG id: COG0666

COG function: function code R; FOG: Ankyrin repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 3 ANK repeats [H]

Homologues:

Organism=Escherichia coli, GI1790447, Length=461, Percent_Identity=23.2104121475054, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002110
- InterPro:   IPR020683
- InterPro:   IPR012927 [H]

Pfam domain/function: PF07906 Toxin_15 [H]

EC number: NA

Molecular weight: Translated: 62156; Mature: 62025

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIINKSASNYVEYISKNNPPYLSKKRDASINLNGKVSDCNGEIIWCRHIASYWSEFFCS
CCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEECCCCCEEEHHHHHHHHHHHHHC
NSGKIDYETFSSPQLLSKAIVIQENKGTNNIKGDVYFVENESWGSVIYNLFLQLEKENKS
CCCCEEEECCCCHHHHHEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCC
HTSLEVHSPGHAMALGIKIKNDKENKFVINFYDPNQTATHKRVFFCTNNICDIINLTAYD
CCEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHH
FLSEQCLKCYGLKEDTLSLFVDKTKSNDNNNVFIKKLPDNILQGVVINFAMGAGLREIIK
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHH
KVYNDTRFTDLTKSQMKILCESKNVNNVPGLLLALQNGHDNVIDEYGTLIKKSNLNKEEL
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHH
IHILSARTLDGTIPGLYQALQNGHAQAIKSYGNLVLDTINKNIDLEYLLSAFKYEAHSSN
HHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCEEEEHHCCCCCHHHHHHHHHHHCCCCC
KYTPGLFSAFQNGHADAIKAYCGVLGNSNLKRGEIIRMLEARNYDGAPGLLLAYQNGDIN
CCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHH
TIQSFFDSLIMLDISKDFIEELLTAKHYDFTGLSLAISHRHDHVVKLYGKLFKKLDTSPY
HHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
KMSIILALAIDCERNNANIIIDSEYKSNKAVKEYVEILKEFNICPEKVAEYLSEFSGKHF
EEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEE
LDVYNYYSN
EEHHHHHCC
>Mature Secondary Structure 
PIINKSASNYVEYISKNNPPYLSKKRDASINLNGKVSDCNGEIIWCRHIASYWSEFFCS
CCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEECCEEECCCCCEEEHHHHHHHHHHHHHC
NSGKIDYETFSSPQLLSKAIVIQENKGTNNIKGDVYFVENESWGSVIYNLFLQLEKENKS
CCCCEEEECCCCHHHHHEEEEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCC
HTSLEVHSPGHAMALGIKIKNDKENKFVINFYDPNQTATHKRVFFCTNNICDIINLTAYD
CCEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCCCCCEEEEEECCCHHHHHHHHHH
FLSEQCLKCYGLKEDTLSLFVDKTKSNDNNNVFIKKLPDNILQGVVINFAMGAGLREIIK
HHHHHHHHHCCCCCCCEEEEEEECCCCCCCEEEEEECCHHHHHHHHHHHHHCCCHHHHHH
KVYNDTRFTDLTKSQMKILCESKNVNNVPGLLLALQNGHDNVIDEYGTLIKKSNLNKEEL
HHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCHHHH
IHILSARTLDGTIPGLYQALQNGHAQAIKSYGNLVLDTINKNIDLEYLLSAFKYEAHSSN
HHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHCCEEEEHHCCCCCHHHHHHHHHHHCCCCC
KYTPGLFSAFQNGHADAIKAYCGVLGNSNLKRGEIIRMLEARNYDGAPGLLLAYQNGDIN
CCCCHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCHH
TIQSFFDSLIMLDISKDFIEELLTAKHYDFTGLSLAISHRHDHVVKLYGKLFKKLDTSPY
HHHHHHHHHEEEECCHHHHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
KMSIILALAIDCERNNANIIIDSEYKSNKAVKEYVEILKEFNICPEKVAEYLSEFSGKHF
EEEEEEEEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEE
LDVYNYYSN
EEHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]