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The map label for this gene is ybcO [H]

Identifier: 209396518

GI number: 209396518

Start: 1561467

End: 1561757

Strand: Direct

Name: ybcO [H]

Synonym: ECH74115_1608

Alternate gene names: 209396518

Gene position: 1561467-1561757 (Clockwise)

Preceding gene: 209398953

Following gene: 209397251

Centisome position: 28.02

GC content: 51.89

Gene sequence:

>291_bases
ATGGCTGATTTGAGAAAAGCAGCGCGTAGTCGGGAATGCCAAGTAAGAATCCCTGGCGTATGTAATGGCAACCCTGAAAC
GTCTGTACTGGCACATATCCGGCTGACTGGATTGTGCGGCACCGGTACCAAACCGCCAGACTTGATTGCCACCATTGCAT
GTTCTGCCTGCCACGACGAAATCGACCGCCGCACACATTTTGTCGATGCTGCATATGCAAAAGAATGCGCGCTGGAAGGT
ATGGCGAGAACACAGGTTATCTGGCTGAAAGAGGGGGTTATTAAGGCGTGA

Upstream 100 bases:

>100_bases
CGTAAACCTGAGCTGAAGCCATCCGAAATACCAACACTGCTCGGATATACCGCCAGCCTGGTTGATAAAAAATGGTTGCG
ACTGGCAGCAAGGAGGAATC

Downstream 100 bases:

>100_bases
ATACCTACAGCATCACATTACCCTGGCCTCCGAGCAATAATCGCTACTACCGGCATAATCGCGGGCGCACGCACATCAGC
GCAGAAGGGCAGGCATACCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MADLRKAARSRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAAYAKECALEG
MARTQVIWLKEGVIKA

Sequences:

>Translated_96_residues
MADLRKAARSRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAAYAKECALEG
MARTQVIWLKEGVIKA
>Mature_95_residues
ADLRKAARSRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDEIDRRTHFVDAAYAKECALEGM
ARTQVIWLKEGVIKA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786761, Length=96, Percent_Identity=97.9166666666667, Blast_Score=195, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010774 [H]

Pfam domain/function: PF07102 DUF1364 [H]

EC number: NA

Molecular weight: Translated: 10392; Mature: 10261

Theoretical pI: Translated: 8.13; Mature: 8.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.2 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
8.3 %Cys+Met (Translated Protein)
6.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADLRKAARSRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDE
CCCHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
IDRRTHFVDAAYAKECALEGMARTQVIWLKEGVIKA
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
ADLRKAARSRECQVRIPGVCNGNPETSVLAHIRLTGLCGTGTKPPDLIATIACSACHDE
CCHHHHHCCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHH
IDRRTHFVDAAYAKECALEGMARTQVIWLKEGVIKA
HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8648624; 9278503 [H]