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The map label for this gene is yrdB [H]

Identifier: 209396339

GI number: 209396339

Start: 4267858

End: 4268031

Strand: Reverse

Name: yrdB [H]

Synonym: ECH74115_4602

Alternate gene names: 209396339

Gene position: 4268031-4267858 (Counterclockwise)

Preceding gene: 209397484

Following gene: 209396773

Centisome position: 76.6

GC content: 49.43

Gene sequence:

>174_bases
ATGCAACTGACATGTGCGATCTCTGGCGATAGCCTGGCGTATCGCTTTACAGGAGATACGCCAGAGCAGTGGTTAGCGAG
TTTTCGTCAGCATCGCTGGGACTTGGAAGAAGAAGCGGAAAACTTAATTCAGGAACAAAGTGAAGATGATCAAGGCTGGG
TCTGGTTACCCTGA

Upstream 100 bases:

>100_bases
AGGAGGAATTGTCCGCGTGAATCAGGCCATCCAGTTTCCGGACAGAGAAGAGTGGGTCGAGAATAAAAAATGTGTATGTT
TTCCCGCTCTCGTGAATGGC

Downstream 100 bases:

>100_bases
TCCAGATATTCGTCCTTCCATTTCACGTAATTATTCGCGGAATAGCGTAACCCAGCCTTCTCTTCATCACTTAACGGGCG
GATCTGTTTGACGGGACTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 57; Mature: 57

Protein sequence:

>57_residues
MQLTCAISGDSLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP

Sequences:

>Translated_57_residues
MQLTCAISGDSLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP
>Mature_57_residues
MQLTCAISGDSLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789674, Length=57, Percent_Identity=98.2456140350877, Blast_Score=117, Evalue=9e-29,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009962 [H]

Pfam domain/function: PF07369 DUF1488 [H]

EC number: NA

Molecular weight: Translated: 6728; Mature: 6728

Theoretical pI: Translated: 3.78; Mature: 3.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTCAISGDSLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP
CEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure
MQLTCAISGDSLAYRFTGDTPEQWLASFRQHRWDLEEEAENLIQEQSEDDQGWVWLP
CEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]