| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is phnH [H]
Identifier: 209396310
GI number: 209396310
Start: 5250718
End: 5251302
Strand: Reverse
Name: phnH [H]
Synonym: ECH74115_5613
Alternate gene names: 209396310
Gene position: 5251302-5250718 (Counterclockwise)
Preceding gene: 209400749
Following gene: 209398848
Centisome position: 94.24
GC content: 63.25
Gene sequence:
>585_bases ATGACCCTGGAAACCGCTTTTATGCTTCCCGTGCAGGATGCCCAGCACAGTTTTCGTCGCCTGTTAAAGGCCATGAGCGA GCCGGGCGTGATTGTCGCCCTGCATCAGCTCAAACGCGGCTGGCAGCCGCTGAATATCGCCACCACCAGCGTGCTGCTGA CGCTGGCCGATAACGACACGCCGGTGTGGCTTGCCGCGCCATTGAGCAACGATATCGTCAGCCAGAGCCTGCGTTTTCAT ACCAACGCGCCGCTGGTCAGCCAGCCGGAACAGGCGACCTTCGCGGTAACGGATGAGGCGATTTCCAGCGAACAGCTTAA CGCCCTTTCCACCGGCACCGCCGTTGCGCCGGAAGCGGGCGCAACGCTGATTTTACAGGTCGCCAGCCTGAGCGGCGGGC GCATGCTGCGTCTCACCGGCGCGGGTATTGCCGAAGAACGAATGATCGCCCCGCAGCTGCCGGAGTGCATTCTGCACGAA CTCACCGAGCGCCCGCACCCGTTCCCGCTCGGCATCGACCTGATCCTGACCTGCGGCGAGCGCCTGCTGGCTGTTCCGCG AACCACTCATGTGGAGGTGTGCTGA
Upstream 100 bases:
>100_bases CCCCGCTGGACGCTGACCGTATGGCACGCATTGCCGCACGCCAGGCCGAAGTGAACGCCAGCCGGGTCGACTTCTTTACG ATGGTTCGCGGAGACAACGC
Downstream 100 bases:
>100_bases TGTACGTTGCCGTGAAAGGGGGCGAGAAGGCGATCGACGCCGCCCACGCCCTGCAAGAGAGCCGACGCCGGGGCGATACC GATTTGCCTGAACTGAGCGT
Product: carbon-phosphorus lyase complex subunit
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLAAPLSNDIVSQSLRFH TNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHE LTERPHPFPLGIDLILTCGERLLAVPRTTHVEVC
Sequences:
>Translated_194_residues MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLAAPLSNDIVSQSLRFH TNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHE LTERPHPFPLGIDLILTCGERLLAVPRTTHVEVC >Mature_193_residues TLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDTPVWLAAPLSNDIVSQSLRFHT NAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAGATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHEL TERPHPFPLGIDLILTCGERLLAVPRTTHVEVC
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3625
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnH family [H]
Homologues:
Organism=Escherichia coli, GI1790538, Length=194, Percent_Identity=97.4226804123711, Blast_Score=384, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008772 [H]
Pfam domain/function: PF05845 PhnH [H]
EC number: NA
Molecular weight: Translated: 20913; Mature: 20782
Theoretical pI: Translated: 5.19; Mature: 5.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT CCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEEEEEEEECCCC PVWLAAPLSNDIVSQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAG CEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCHHHHHHHCCCCCCCCCCC ATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGE CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCH RLLAVPRTTHVEVC HHEECCCCCEEECC >Mature Secondary Structure TLETAFMLPVQDAQHSFRRLLKAMSEPGVIVALHQLKRGWQPLNIATTSVLLTLADNDT CCCCEEEEECHHHHHHHHHHHHHHCCCCEEEEEHHHHCCCCCCEEEEEEEEEEEECCCC PVWLAAPLSNDIVSQSLRFHTNAPLVSQPEQATFAVTDEAISSEQLNALSTGTAVAPEAG CEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHHCHHHHHHHCCCCCCCCCCC ATLILQVASLSGGRMLRLTGAGIAEERMIAPQLPECILHELTERPHPFPLGIDLILTCGE CEEEEEEECCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHCCH RLLAVPRTTHVEVC HHEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]