Click here to switch to the map view.

The map label for this gene is ygjK [H]

Identifier: 209396102

GI number: 209396102

Start: 4071502

End: 4073853

Strand: Direct

Name: ygjK [H]

Synonym: ECH74115_4394

Alternate gene names: 209396102

Gene position: 4071502-4073853 (Clockwise)

Preceding gene: 209396676

Following gene: 209399199

Centisome position: 73.07

GC content: 54.55

Gene sequence:

>2352_bases
ATGAAAATCAAAACTATTTTAACGCCAGTAACCTGCGCTCTGCTGATAAGTTTTTCCGCCCATGCCACTAACGCCGACAA
TTATAAAAACGTGATTAACCGTACTGGTGCGCCGCAGTACATGAAGGATTACGATTACGACGATCACCAGCGTTTTAATC
CGTTTTTCGATCTCGGAGCCTGGCATGGTCATCTGTTGCCAGACGGCCCGAACACCATGGGCGGCTTTCCGGGCGTTGCG
CTGCTGACGGAAGAATACATCAACTTTATGGCCAGCAATTTCGACCGCCTGACCGTCTGGCAGGACGGCAAGAAAGTCAA
CTTCACGCTGGAGGCATACAATATTCCCGGCGCGCTGGTGCAAAAACTGACAGCAAAAGATGTGCAGGTCGAAATGACTC
TGCGCTTCGCCACGCCGCGCACGTCACTACTGGAAACTAAAATCATCAGCAATAAACCGCTGGATCTGGTGTGGGATGGC
GAACTGCTGGAAAAACTGGAAGCGAAAGAAGGGAAACCGCTTTCCGATAAAACCATTGCTGGCGAATACCCTGACTACCA
GCGCAAAATCAGCGCCACCCGTGATGGCCTGAAAGTCACCTTTGGCAAAGTGCGCGCCACCTGGGATCTGCTGACCTCCG
GTGAATCAGAATATCAGGTGCATAAATCCCTGCCGGTGCAGACTGAAATCAACGGCAATCGCTTTACCAGTAAGGCGCAT
ATCAACGGTTCGACGACGCTCTATACCACCTATTCCCATCTGCTGACCTCTCAGGAAGTTAGCAAAGAGCAAATGCAGAT
CCGCGATATTCTGGCGCGTCCGGCGTTTTATCTCACCGCCTCGCAGCAACGCTGGGAAGAGTATCTGAAGAAAGGGTTAA
CCAATCCGGATGCGACGCCGGAACAGACACGCGTCGCGGTGAAAGCGATCGAAACGCTCAACGGTAACTGGCGCTCGCCT
GGGGGTGCGGTGAAATATAACACCGTCACGCCGTCGGTGACCGGGCGCTGGTTCTCCGGCAATCAGACCTGGCCGTGGGA
TACCTGGAAGCAGGCGTTTGCGATGGCGCATTTCAATCCGGACATCGCCAAAGAGAATATCCGCGCGGTCTTCTCCTGGC
AGATCCAGCCTGGCGACAGCGTGCGTCCGCAGGATGTGGGCTTTGTCCCCGACCTGATAGCGTGGAATCTTAGCCCCGAG
CGTGGTGGCGATGGTGGCAACTGGAACGAACGAAATACCAAACCCAGCCTTGCCGCCTGGTCGGTGATGGAAGTGTACAA
CGTCACCCAGGATAAAACCTGGGTGGCAGAGATGTACCCGAAACTGGTGGCCTATCACGACTGGTGGTTACGTAACCGCG
ATCACAACGGCAACGGCGTGCCGGAATATGGCGCGACCCGCGACAAAGCCCACAACACTGAGAGCGGCGAGATGCTGTTT
ACGGTGAAGAAAGGCAACAAAGAAGAGACGCAGTCTGGGCTGAACAACTACGCCCGCGTGGTGGAGAAAGGCCAGTACGA
CAGTCTGGAAATTCCGGCACAGGTTGCTGCATCGTGGGAATCGGGGCGTGATGATGCCGCCGTCTTTGGGTTTATCGACA
AAGAACAGCTGGATAAATATGTCGCAAGCGGCGGCAAACGTAGCGACTGGACAGTGAAATTCGCCGAAAACCGCAGTCAG
GACGGAACGTTGCTGGGGTACTCGCTATTGCAGGAGTCGGTGGATCAGGCCAGCTATATGTACAGCGATAACCATTATCT
GGCGGAGATGGCGACGATTCTCGGTAAACCGGAAGAGGCTAAGCGCTATCGCCAGTTGGCACAGCAGCTCGCGGACTACA
TCAACACCTGTATGTTCGACCCGGCTACGCAGTACTTCTATGACGTGCGTATTGAAGATAAACCGCTGGCGAACGGCTGC
GCGGGCAAACCGATTGTTGAGCGCGGTAAAGGGCCGGAAGGCTGGTCGCCGCTGTTTAACGGTGCGGCAACGCAGGCCAA
TGCCGACGCGGTGGTGAAGGTGATGCTCGATCCTAAAGAGTTCAATACCTTTGTTCCGCTGGGAACGGCGGCGTTAACCA
ATCCGGCCTTTGGCGCTGATATCTACTGGCGCGGGCGCGTATGGGTGGATCAGTTCTGGTTTGGTCTGAAAGGGATGGAG
CGTTACGGTTATCGCGATGATGCCCTGAAACTGGCGGATACGTTCTTCCGGCACGCCAAAGGGTTAACCGCCGATGGCCC
AATTCAGGAAAATTACAACCCGCTGACAGGCGCACAGCAAGGCGCACCAAATTTCTCCTGGAGTGCCGCACATTTTTATA
TGTTGTATAACGATTTTTTCCGTAAGCAATAA

Upstream 100 bases:

>100_bases
GCTTTTGATAGCCGCTTCTACATGAAAAATGCCTCTAACGATCCCAGCGACCAAATCTTCCTGATGCAATATTTCTACTG
GTAATAAGGACTGTAATTTC

Downstream 100 bases:

>100_bases
TTTGCAACGGCTGGCGGATGCGGCGTGAACGCCTTATCCGCCCTACATATTCGTTCCCGTAGGCTGGATAAGACGCGACA
AGCGTCGCATCCGGCATCTG

Product: putative glycosyl hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 783; Mature: 783

Protein sequence:

>783_residues
MKIKTILTPVTCALLISFSAHATNADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYNIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTSQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGNKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVASGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPATQYFYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHFYMLYNDFFRKQ

Sequences:

>Translated_783_residues
MKIKTILTPVTCALLISFSAHATNADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYNIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTSQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGNKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVASGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPATQYFYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHFYMLYNDFFRKQ
>Mature_783_residues
MKIKTILTPVTCALLISFSAHATNADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGAWHGHLLPDGPNTMGGFPGVA
LLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYNIPGALVQKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDG
ELLEKLEAKEGKPLSDKTIAGEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
INGSTTLYTTYSHLLTSQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATPEQTRVAVKAIETLNGNWRSP
GGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNPDIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPE
RGGDGGNWNERNTKPSLAAWSVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
TVKKGNKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKYVASGGKRSDWTVKFAENRSQ
DGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEAKRYRQLAQQLADYINTCMFDPATQYFYDVRIEDKPLANGC
AGKPIVERGKGPEGWSPLFNGAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHFYMLYNDFFRKQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1789462, Length=783, Percent_Identity=98.4674329501916, Blast_Score=1612, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008928
- InterPro:   IPR001661 [H]

Pfam domain/function: PF01204 Trehalase [H]

EC number: NA

Molecular weight: Translated: 88398; Mature: 88398

Theoretical pI: Translated: 6.30; Mature: 6.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTILTPVTCALLISFSAHATNADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYNIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHHCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCCHHHHHHHCCCCCEEEEEHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTSQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGNKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VASGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPATQYFYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHFYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RKQ
HCC
>Mature Secondary Structure
MKIKTILTPVTCALLISFSAHATNADNYKNVINRTGAPQYMKDYDYDDHQRFNPFFDLGA
CCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHCCCCCCCCCCCCHHCCCC
WHGHLLPDGPNTMGGFPGVALLTEEYINFMASNFDRLTVWQDGKKVNFTLEAYNIPGALV
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCEEEEEEEEECCCHHHH
QKLTAKDVQVEMTLRFATPRTSLLETKIISNKPLDLVWDGELLEKLEAKEGKPLSDKTIA
HHHHHCCEEEEEEEEECCCCHHHHHHHHHCCCCCEEEECHHHHHHHHHCCCCCCCCCCCC
GEYPDYQRKISATRDGLKVTFGKVRATWDLLTSGESEYQVHKSLPVQTEINGNRFTSKAH
CCCCCHHHHHHHCCCCCEEEEEHHHEEEHHHHCCCCCEEHHHCCCEEEECCCCEEEEEEE
INGSTTLYTTYSHLLTSQEVSKEQMQIRDILARPAFYLTASQQRWEEYLKKGLTNPDATP
CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHCCCCCCCCH
EQTRVAVKAIETLNGNWRSPGGAVKYNTVTPSVTGRWFSGNQTWPWDTWKQAFAMAHFNP
HHHHHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHCCH
DIAKENIRAVFSWQIQPGDSVRPQDVGFVPDLIAWNLSPERGGDGGNWNERNTKPSLAAW
HHHHHCEEEEEEEEECCCCCCCCCCCCCCCHHHEECCCCCCCCCCCCCCCCCCCCCHHHH
SVMEVYNVTQDKTWVAEMYPKLVAYHDWWLRNRDHNGNGVPEYGATRDKAHNTESGEMLF
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
TVKKGNKEETQSGLNNYARVVEKGQYDSLEIPAQVAASWESGRDDAAVFGFIDKEQLDKY
EEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCCCCEEEECCCHHHHHHH
VASGGKRSDWTVKFAENRSQDGTLLGYSLLQESVDQASYMYSDNHYLAEMATILGKPEEA
HHCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHEEECCCHHHHHHHHHHCCCHHH
KRYRQLAQQLADYINTCMFDPATQYFYDVRIEDKPLANGCAGKPIVERGKGPEGWSPLFN
HHHHHHHHHHHHHHHHHCCCCCHHEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCCHHHC
GAATQANADAVVKVMLDPKEFNTFVPLGTAALTNPAFGADIYWRGRVWVDQFWFGLKGME
CCCCCCCCCEEEEEEECHHHCCCCCCCCHHHHCCCCCCCCEEECCEEEHHHHHHHHHHHH
RYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAPNFSWSAAHFYMLYNDFF
HCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
RKQ
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]