| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
Click here to switch to the map view.
The map label for this gene is yhhM [H]
Identifier: 209396037
GI number: 209396037
Start: 4427578
End: 4427937
Strand: Reverse
Name: yhhM [H]
Synonym: ECH74115_4787
Alternate gene names: 209396037
Gene position: 4427937-4427578 (Counterclockwise)
Preceding gene: 209399986
Following gene: 209398368
Centisome position: 79.47
GC content: 50.56
Gene sequence:
>360_bases ATGAGCAAACCACCTCTTTTCTTTATTGTTATCATTGGCTTAATCATCGTCGCCGCATCGTTTCGTTTTATGCAACAGCG ACGGGAAAAAGCTGATAATGATATGGCACCACTCCAGCAAAAGCTGGTGTTGGTGAGCAACAAGCGGGAAAAACCGATTA ACGATCGCCGTTCGCGCCAGCAGGAAGTGACTCCGGCAGGCACCAGTATGCGCTATGAGGCAAGCTTCAAACCGCAAAGC GGAGGAATGGAGCAGACGTTTCGCCTCGACGCCCAGCAGTACCACGCCCTGACAGTGGGCGATAAAGGTACGCTGAGCTA TAAAGGAACGCGCTTTGTTAGCTTTGTTGGCGAACAATAA
Upstream 100 bases:
>100_bases CCTACGGTCTTGCTTCCAGTTTAGTGGCGAGGGTGGACGGATGACAACACCATAACTGGCAGGGTATGCTTATTTCCGCA TTTTCCGATGAGGGATAAAG
Downstream 100 bases:
>100_bases GGTTATTTTTTAACTTTAAATTTCTTCTGCCAGACCAGCAGTTCAAACACGCCGAAAAGGAAAATCCGCACCTTTTCGGC GGTGGTCATCTGCGGGCCAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 119; Mature: 118
Protein sequence:
>119_residues MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVLVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ
Sequences:
>Translated_119_residues MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVLVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQS GGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ >Mature_118_residues SKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVLVSNKREKPINDRRSRQQEVTPAGTSMRYEASFKPQSG GMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789877, Length=119, Percent_Identity=97.4789915966387, Blast_Score=241, Evalue=6e-66,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR019635 [H]
Pfam domain/function: PF10694 DUF2500 [H]
EC number: NA
Molecular weight: Translated: 13543; Mature: 13412
Theoretical pI: Translated: 10.69; Mature: 10.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVLVSNKREKPINDRRSRQ CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCEEEEEECCC >Mature Secondary Structure SKPPLFFIVIIGLIIVAASFRFMQQRREKADNDMAPLQQKLVLVSNKREKPINDRRSRQ CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCHHHHHH QEVTPAGTSMRYEASFKPQSGGMEQTFRLDAQQYHALTVGDKGTLSYKGTRFVSFVGEQ HCCCCCCCCEEEEECCCCCCCCCCHHEEECHHHHEEEECCCCCCEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8041620; 9278503 [H]