| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is hokE
Identifier: 209395884
GI number: 209395884
Start: 694116
End: 694268
Strand: Direct
Name: hokE
Synonym: ECH74115_0665
Alternate gene names: 209395884
Gene position: 694116-694268 (Clockwise)
Preceding gene: 209396640
Following gene: 209398840
Centisome position: 12.46
GC content: 47.71
Gene sequence:
>153_bases ATGCTGACGAAATATGCCCTTGTGGCAGTCATAGTGCTGTGTTTGACGGTGCTGGGATTTACGCTTCTGGTCGGAGACTC GCTGTGTGAGTTCACCGTAAAGGAACGTAATATTGAGTTTAAGGCTGTTCTCGCTTACGAACCGAAGAAGTAG
Upstream 100 bases:
>100_bases GATGAAGCCCCAGGAGATATTTCTATCAATCCTGGGGCTGCCACTCCGAGCCCCAACAACTCGGATGGTAGTCCCTTCTT CGCATGGAGGCAATATAAAC
Downstream 100 bases:
>100_bases CCGTTGTGCGGGGAGCAATCCCCGCATATCCGGTTGTCAGGTCAGAGTGGTAAGGCACCTGCTTTACACTTTCGCCCGCA GTCAGTGATGGCTGCGGGCG
Product: Hok/Gef family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 50; Mature: 50
Protein sequence:
>50_residues MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Sequences:
>Translated_50_residues MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK >Mature_50_residues MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the hok/gef family
Homologues:
Organism=Escherichia coli, GI48994879, Length=50, Percent_Identity=98, Blast_Score=98, Evalue=9e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HOKE_ECO57 (Q8XBW9)
Other databases:
- EMBL: AE005174 - EMBL: BA000007 - PIR: E90706 - PIR: H85556 - RefSeq: NP_286308.1 - RefSeq: NP_308648.1 - EnsemblBacteria: EBESCT00000027145 - EnsemblBacteria: EBESCT00000056058 - GeneID: 916980 - GeneID: 957587 - GenomeReviews: AE005174_GR - GenomeReviews: BA000007_GR - KEGG: ece:Z0722 - KEGG: ecs:ECs0621 - GeneTree: EBGT00050000009510 - HOGENOM: HBG473224 - ProtClustDB: CLSK879702 - BioCyc: ECOL83334:ECS0621-MONOMER - InterPro: IPR000021 - InterPro: IPR018084 - PRINTS: PR00281 - ProDom: PD005979
Pfam domain/function: PF01848 HOK_GEF
EC number: NA
Molecular weight: Translated: 5592; Mature: 5592
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: PS00556 HOK_GEF
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x25a9a740)-;
Cys/Met content:
4.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCH >Mature Secondary Structure MLTKYALVAVIVLCLTVLGFTLLVGDSLCEFTVKERNIEFKAVLAYEPKK CCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEEEEECCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796