| Definition | Escherichia coli O157:H7 str. EC4115, complete genome. |
|---|---|
| Accession | NC_011353 |
| Length | 5,572,075 |
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The map label for this gene is ybgA [H]
Identifier: 209395854
GI number: 209395854
Start: 818919
End: 819428
Strand: Direct
Name: ybgA [H]
Synonym: ECH74115_0797
Alternate gene names: 209395854
Gene position: 818919-819428 (Clockwise)
Preceding gene: 209396877
Following gene: 209397896
Centisome position: 14.7
GC content: 50.0
Gene sequence:
>510_bases ATGAATCAGCAACGATTTGATGACAGCACTCTAATCCGTATCTTCGCGCTTCATGAGTTACATCGACTGAAAGAACATGG CTTAACGCGCGGGGCGCTTCTCGATTATCACAGCCGCTATAAACTCGTATTTCTGGCTCATTCCCAGCCGGAATACCGCA AACTTGGCCCGTTCGTGGCTGATATTCACCAGTGGCAAAATCTGGATGATTTTTACAACCAGTACCGCCAACGCGTAATT GTTTTGCTTTCTCATCCCGCCAACCCGCGCGATCACACCAACGTTTTGATGCACGTTCAGGGTTATTTTCGCCCGCATAT TGAGTCCACAGAACGCCAGCAGCTGGCTGCGCTTATCGACAGTTATCGCCGTGGCGAGCAACCGCTTCTTGCGCCGCTGA TGCGTATCAAACACTATATGGCGCTTTATCCTTACGCCTGGCTTTCAGGGCAGCGTTATTTCGAACTTTGGCCGCGTGTG ATTAACTTGCGCCATTCAGGAGTTTTATGA
Upstream 100 bases:
>100_bases TTGAACTGGATATAACAGCTTGGTAGGGAAGAAAGCATAACCCCACAAAATTCATTTACCATCGTCTACACTTACTCCTG TAAACCGTTCAGGAGCAGTA
Downstream 100 bases:
>100_bases CTACCCATCTGGTCTGGTTTCGCCAGGATTTACGTCTGCATGATAATCTCGCGCTGGCTGCCGCCTGCCGCAATTCATCT GCACGCCTGCTGGCGTTGTA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF169; TKP [H]
Number of amino acids: Translated: 169; Mature: 169
Protein sequence:
>169_residues MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDFYNQYRQRVI VLLSHPANPRDHTNVLMHVQGYFRPHIESTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPYAWLSGQRYFELWPRV INLRHSGVL
Sequences:
>Translated_169_residues MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDFYNQYRQRVI VLLSHPANPRDHTNVLMHVQGYFRPHIESTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPYAWLSGQRYFELWPRV INLRHSGVL >Mature_169_residues MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVADIHQWQNLDDFYNQYRQRVI VLLSHPANPRDHTNVLMHVQGYFRPHIESTERQQLAALIDSYRRGEQPLLAPLMRIKHYMALYPYAWLSGQRYFELWPRV INLRHSGVL
Specific function: Unknown
COG id: COG3272
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786925, Length=169, Percent_Identity=97.0414201183432, Blast_Score=338, Evalue=2e-94,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013560 [H]
Pfam domain/function: PF08349 DUF1722 [H]
EC number: NA
Molecular weight: Translated: 20287; Mature: 20287
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCHHHHCHHHH DIHQWQNLDDFYNQYRQRVIVLLSHPANPRDHTNVLMHVQGYFRPHIESTERQQLAALID HHHHHCCHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHH SYRRGEQPLLAPLMRIKHYMALYPYAWLSGQRYFELWPRVINLRHSGVL HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MNQQRFDDSTLIRIFALHELHRLKEHGLTRGALLDYHSRYKLVFLAHSQPEYRKLGPFVA CCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEEEEEEECCCCCHHHHCHHHH DIHQWQNLDDFYNQYRQRVIVLLSHPANPRDHTNVLMHVQGYFRPHIESTERQQLAALID HHHHHCCHHHHHHHHHHHEEEEECCCCCCCCCCCEEEEEHHHCCCCCCCHHHHHHHHHHH SYRRGEQPLLAPLMRIKHYMALYPYAWLSGQRYFELWPRVINLRHSGVL HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6325460; 8905232; 9278503; 8387990 [H]