| Definition | Helicobacter pylori G27, complete genome. |
|---|---|
| Accession | NC_011333 |
| Length | 1,652,982 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 208435384
GI number:
Start: 1557796
End: 1561350
Strand: Reverse
Name: Not Available
Synonym: HPG27_1441
Alternate gene names: NA
Gene position: NA
Preceding gene: 208435385
Following gene: 208435383
Centisome position: NA
GC content: NA
Gene sequence:
>3555_bases ATGATTCGTTTCGCTCGCACCCCACTCAAGGATTTTATTAAAAAACACAATCCCCAAGAACCCAAAAAGGAAATTATAGA AAATTTTGAAAAAGAAATAAACAGCTTATTAGAAAACGCAAAAAGACAAGATGATGAAGAGTTTCAAAAAAATGAAATCA ATTCTTTTTTAAAAAACACTTATGGCTATCGCTGCAATACCTATGAAAAAGTGGATAGCGCGATCTATGTGGATAAAGAA GCTTGGGTGCTTATTGAAGTCAAAGCCCTAGATAAAAAGACAGAATTCCCTAAAAACAAAGAAAACCCACTCAGTAAAGC CTTTTGTCAAATGGTTTTGTATTTTTTGGAAGAGATAGAAAAAGAAAAAAACAATTCCCTAAAACACACCATTATTTGCA ACGTGCATGAATTTTTCCTCTTTGATTGTAAGGATTTACTCTTTTTAAAAAAAGATAAACGCATCAAAAAATTCTATGAA AATTACGCTAAAAAAGAAGGCACAGACTCTTCAAAACCAAAATTTTACAAAGATTTAGAACAATATTTGCAAAAAGATTT TCAAGGCGAACTCCCCTACACTCACTTTAATTTGAGCGATGATTTTAAAGAACTCCCTTTGATTTACCAAGTTTTAAGCC ACGAAGTCCTTTTAAAACAAAGGAAAACCCTTGACGCTAACACGCTTAACAAAGATTTTTATGAAGAATTGCTCTATATT TTAGGATTAGAAGAGCAAAATGAAAAAGGGAAAATTTTAATCAAACCCAGCCGCACCCAAAACTCCCTAAGCGATGCTTT AAAAGAGAAATACAAAAATTTAGACGATGAAGAAGTCATGGCGTTACTCATCGCTTGGAATAACCGCATCTTGTTTTTAC GGCTTTTAGAAAGCCTTTTAATCTCGTTCGAGCATTTTAAAAATGAAAATCATTTCTTAACTACAGAAAACTTTAAAGAT TTCAACGCCCTAAACACCCTCTTTTTTGAAGTCCTAGCCAAGAAAAATAACGAGCGTTTGTCAGAAATTAAAGAAGACAA GATTTTAGAAAAAATCCCTTATTTGAATTCCAGTTTGTTTGATAAAACGCCTTTAGAATTAAAGGGGTATGAAATCAAGC TTTTAGAAAATAAAAAGCTAGAAATCTATAAAAATTCCGTTCTCAAAAAAGACAACCCAAAACAAGAGCCTTTGCCCTTG CTAGAATACCTTTTTGAATTTTTGCGCGTTTATGATTTCACCACCACCCCTAAAGACATTAAAGATAATCAAAATAAGAG CGAAAGCCGTTTGATTAACCCTAGCGTTTTAGGGCTTGTTTTTGAAAAACTCAACGGCTATAAAGAGGGGAGCTTTTATA CCCCAAGCTTCATCACAAGCTACATGTGTAAAGAGAGTATCAAGACAATTGTGTTGGATAAATTCAACGCCACTTATCAG TGGGACTGCAAAGATTTAGAAGCGTTGAAAGGAAAAATAGACAGAAATTTTTCAAATGAAAAAGCTAAAGAATACTTGCA ACTCCTTCTCACTTTACGCATTTGCGATCCGGCGGTAGGGAGCGGGCATTTCTTGGTTTCAGCACTCAATGAAATGGTGT GGATTGCTTATGAGCTAGGGCTTATTGCTTCCTTGCATCGCTACGATCTTAAATTAGAAAACGATGAAATCATCATTCAC TACAAGCTAACGGGTGAAATCTTTAACTACAAAAAACCAGATAGCGAAAACGACCCCCACCACCACATCCAAAAAGAACT TTTTGAGCTTAAAAAATCCATCATTGAAAACTGCCTTTTTGGCGTGGATATTAACCCCAATTCTTGCGAAATCACCAAGC TTAGGCTATGGATAGAGCTTTTAAAATACAGCTATTATATTTTTGAAAAGGACAAGAACACTAACGCGCTTGAAACCCTC CCCAACATTGACATTAACATTAAGTGTGCTAACAGCTTGATTTCACGCTTTAATTTGAATGACGATCTCAAAAAGATCCC CAATATCAAGAAAAAAATCCAAGAATACAAAGATTTAGTCGCCCAATACAAAGACCCAAATCCTCTCTATCCCTTAAATA AAGCAGATCTTATCAACAAAATCCAAGACTTAAAAAACACTTTTTCCCTCACGCTCAAAGATCCTAAAACCAAAGCAGAG CTTGAAAAGACTATTGAAAAACACATCAAAAAATACAATTTCTTTGCCCTAGACGATAAGAGTTTGCTAGATGGGTTAAA TTACTTTATCCCAAGCCTTTTTGGCACGCTTAAACTAAGCCCTAAAGAAGAGGAAGAGGCTTTTGCTTCTTATGGGCGTA TTAGAGCTTTGAGAAAAAAGCTTGATGATGCCTTGAGTGGTAGAGAGTATCAAAATGCGTTTGAATGGCGCTTTGAATTC CCTGAAGTTTTAAATGATGAGGGGGATTTTTTAGGCTTTGATTGCATCATAGGCAACCCGCCTTATATTGATTATAGAAA AATAGATGAAAAAACTAAAATCTTTTTATCTAAATTTTCTAGTGTATACAAAAAATCAAAAGAGGGAAGCATTTTTGTAT ATTTTATTGAGCGTGCCTCCAAGCTCATTATTAAGCATGGTTTAATTTCTTTCATCAACCCAATTGCTTATCTTTGCAAG CCAACAGATCATGGGATTAGGGATTATATTGATAAAAATTTGAAAATTACAATGCTTATTGATTTGTCAAATATAAAAAT TTTTGAATCTGCTTCAACTTATACATGTATCAATATTTTTAAAAGAGAAAATAAGAAAAATGAAATTTTATTTTTAAGAT CTGATGATCTTAATGAATTGTCTAGCAATAAAGACGATTTTTTGAAAATTCCGGATGTTAATATAGAGCGTATATCCATT TTTTTAGACCCCATATCTAGGCATATTGCAGAAAGATTTAAGACACAATTAGGTGATTTTTGTAAGATTTTTTGCGGTTT ATCTAAAACAGGTTTTCGTTCAGATGTAATCAATACAAACAGTGAAAAAAGTGTTTATTTTTTGGAATCATCAGATATTT ATAGATATTATGTAAATGATTTTGGAAAAAAATTTTTAAAGAGAATTGATGACTATTTTTCACAAGAGAAGCGAGAAATC TTTGAACAACAAGATATTATTTTTATGACAAGAATGACTAATCAGATTAGATGTATTGTTGTTCCTTTAGGAGTGTATGG AGGAAAAGTGAATATACTCTATGATTTTAGGATTGATAGATTTTTGATTTTGGGTGTTTTAAATTCAAAATTAATGACAT ATTTTTATAAGAAAAAATTTTTTCCAACACATATGCAGGGTGGGGCTTTTGGTTTTGATACTCTAAGTGTTGAAACTCTT CCAATCCCACAAATCACCAAATCAAACAAGCCTACAGCCGATAAAATCACCGATTGCGCGAAGCAAATCCTAGCGCTAAA AGAAAAAGACCTTAAAACCAACACCCAAAGATTAGAAAAAGAAATTGACGCCTTAGTCTATCAGCTCTACAACCTCACCG ATGAAGAAATTAAGATCATTGAAGACGGGCAGTGA
Upstream 100 bases:
>100_bases TCTAATGTTTCACATGGAACAATTTCAAAGAAAAGCGTTTTATTTAAAATTCATGGTGCTTTTGTTATAATCGTTTTTAT CCCATTTTAAAGGCGTTTTT
Downstream 100 bases:
>100_bases AAAGCTGATTTCCCACTTAAGGATAACCCCCTAATTTAGGGGGCAACTCTTTTTAAGAATTAGCGTTTAATCACTAGATC AAACTTTAAACCCAAAAAAC
Product: type II S restriction-modification protein
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>1184_residues MIRFARTPLKDFIKKHNPQEPKKEIIENFEKEINSLLENAKRQDDEEFQKNEINSFLKNTYGYRCNTYEKVDSAIYVDKE AWVLIEVKALDKKTEFPKNKENPLSKAFCQMVLYFLEEIEKEKNNSLKHTIICNVHEFFLFDCKDLLFLKKDKRIKKFYE NYAKKEGTDSSKPKFYKDLEQYLQKDFQGELPYTHFNLSDDFKELPLIYQVLSHEVLLKQRKTLDANTLNKDFYEELLYI LGLEEQNEKGKILIKPSRTQNSLSDALKEKYKNLDDEEVMALLIAWNNRILFLRLLESLLISFEHFKNENHFLTTENFKD FNALNTLFFEVLAKKNNERLSEIKEDKILEKIPYLNSSLFDKTPLELKGYEIKLLENKKLEIYKNSVLKKDNPKQEPLPL LEYLFEFLRVYDFTTTPKDIKDNQNKSESRLINPSVLGLVFEKLNGYKEGSFYTPSFITSYMCKESIKTIVLDKFNATYQ WDCKDLEALKGKIDRNFSNEKAKEYLQLLLTLRICDPAVGSGHFLVSALNEMVWIAYELGLIASLHRYDLKLENDEIIIH YKLTGEIFNYKKPDSENDPHHHIQKELFELKKSIIENCLFGVDINPNSCEITKLRLWIELLKYSYYIFEKDKNTNALETL PNIDINIKCANSLISRFNLNDDLKKIPNIKKKIQEYKDLVAQYKDPNPLYPLNKADLINKIQDLKNTFSLTLKDPKTKAE LEKTIEKHIKKYNFFALDDKSLLDGLNYFIPSLFGTLKLSPKEEEEAFASYGRIRALRKKLDDALSGREYQNAFEWRFEF PEVLNDEGDFLGFDCIIGNPPYIDYRKIDEKTKIFLSKFSSVYKKSKEGSIFVYFIERASKLIIKHGLISFINPIAYLCK PTDHGIRDYIDKNLKITMLIDLSNIKIFESASTYTCINIFKRENKKNEILFLRSDDLNELSSNKDDFLKIPDVNIERISI FLDPISRHIAERFKTQLGDFCKIFCGLSKTGFRSDVINTNSEKSVYFLESSDIYRYYVNDFGKKFLKRIDDYFSQEKREI FEQQDIIFMTRMTNQIRCIVVPLGVYGGKVNILYDFRIDRFLILGVLNSKLMTYFYKKKFFPTHMQGGAFGFDTLSVETL PIPQITKSNKPTADKITDCAKQILALKEKDLKTNTQRLEKEIDALVYQLYNLTDEEIKIIEDGQ
Sequences:
NA
Specific function: NA
COG id: COG1002
COG function: function code V; Type II restriction enzyme, methylase subunits
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA