Click here to switch to the map view.

The map label for this gene is YidC

Identifier: 20809127

GI number: 20809127

Start: 2687959

End: 2688579

Strand: Reverse

Name: YidC

Synonym: TTE2799

Alternate gene names: 20809127

Gene position: 2688579-2687959 (Counterclockwise)

Preceding gene: 20809128

Following gene: 20809126

Centisome position: 99.97

GC content: 38.33

Gene sequence:

>621_bases
ATGGCAACAATTGCTATGTATTTAGGACAGCTTTTAGAGTTTATTCACCATTACGTGGGCAATTACGGCGTAGCTATAAT
AGTCTTTACAGTTTTCATAAGAATTCTTCTTTTGCCTTTTTACATTCAGCAGATGGCTATGATGAAGAAAATGAAAGAAA
TACAACCTTTGGTGGAAGAGCTCAAGAAGAAGTACGGCAAGGACCCCCAAAAACTCAATATGGAAACCATGAAGCTTTAT
CAGGAGAAAAAGATAAATCCTTTTGGTGGTTGTCTTCCAATGCTTTTGCCTTTAATAATTTTATGGCCGCTTTTTACGAT
GCTTAGAACCTATCCAGCCTTTTCGACAGCATCTTTTTTGTGGATGCACAGCCTAGCTGAGAGAGACCCTTATTATATAA
TTCCAATTTTAGCTACAGTAACTACTTATATATCTTCTGCTATGGTCGCTACAGATAAGAGTCAGAACTCTATGAATATA
ATGATGTCTCTTTTCATGGGTTGGATTACTGTCACATTGCCGGCTGGAGTGGGGATTTATTGGGTTACGAGCAATATATT
CCAGATAGTTCAGCAGTATATTTTCATGAGGGAGACCAAAACGCTCAAGGGGGAATCCTGA

Upstream 100 bases:

>100_bases
TTTAAAGGGTGGATTGATGTCAATTTGGAGGATTTTGAGGTGTAATCCCTTTAACCCTGGAGGATACGACCCTGTAAAAT
AACTGTTTTGGAGGTATACT

Downstream 100 bases:

>100_bases
ATTGAAAGAATTAATAAGAACTGGTAAAACAGTGGAGGAGGCCATAAATCTTGCGCTTAAAGATTTTGGCGTCCCGAGAG
ATATGGTAGAAGTGGAAGTG

Product: preprotein translocase subunit YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 206; Mature: 205

Protein sequence:

>206_residues
MATIAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEELKKKYGKDPQKLNMETMKLY
QEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFLWMHSLAERDPYYIIPILATVTTYISSAMVATDKSQNSMNI
MMSLFMGWITVTLPAGVGIYWVTSNIFQIVQQYIFMRETKTLKGES

Sequences:

>Translated_206_residues
MATIAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEELKKKYGKDPQKLNMETMKLY
QEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFLWMHSLAERDPYYIIPILATVTTYISSAMVATDKSQNSMNI
MMSLFMGWITVTLPAGVGIYWVTSNIFQIVQQYIFMRETKTLKGES
>Mature_205_residues
ATIAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEELKKKYGKDPQKLNMETMKLYQ
EKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFLWMHSLAERDPYYIIPILATVTTYISSAMVATDKSQNSMNIM
MSLFMGWITVTLPAGVGIYWVTSNIFQIVQQYIFMRETKTLKGES

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 3 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=202, Percent_Identity=35.6435643564356, Blast_Score=133, Evalue=1e-32,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_THETN (Q8R6K6)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_624298.1
- GeneID:   995648
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE2799
- NMPDR:   fig|273068.3.peg.2408
- HOGENOM:   HBG560622
- OMA:   RIMNIFT
- ProtClustDB:   CLSK901845
- BioCyc:   TTEN273068:TTE2799-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR00701
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 23855; Mature: 23724

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x101dc458)-; HASH(0x10d24e78)-; HASH(0x10b3f7c8)-; HASH(0xd20ac6c)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
8.3 %Met     (Translated Protein)
8.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEE
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKKYGKDPQKLNMETMKLYQEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WMHSLAERDPYYIIPILATVTTYISSAMVATDKSQNSMNIMMSLFMGWITVTLPAGVGIY
HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
WVTSNIFQIVQQYIFMRETKTLKGES
HHHHHHHHHHHHHHHHHHHHHCCCCH
>Mature Secondary Structure 
ATIAMYLGQLLEFIHHYVGNYGVAIIVFTVFIRILLLPFYIQQMAMMKKMKEIQPLVEE
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LKKKYGKDPQKLNMETMKLYQEKKINPFGGCLPMLLPLIILWPLFTMLRTYPAFSTASFL
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
WMHSLAERDPYYIIPILATVTTYISSAMVATDKSQNSMNIMMSLFMGWITVTLPAGVGIY
HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCHHH
WVTSNIFQIVQQYIFMRETKTLKGES
HHHHHHHHHHHHHHHHHHHHHCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11997336