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The map label for this gene is Ssb3

Identifier: 20809109

GI number: 20809109

Start: 2670877

End: 2671329

Strand: Reverse

Name: Ssb3

Synonym: TTE2780

Alternate gene names: 20809109

Gene position: 2671329-2670877 (Counterclockwise)

Preceding gene: 20809110

Following gene: 20809108

Centisome position: 99.33

GC content: 44.81

Gene sequence:

>453_bases
ATGTTAAATAAAGTAATTCTGATAGGCCGCTTGACAAAAGACCCTGTCATGAGGTATACCTCTGACATGGTTCCTGTTAC
TACCTTTACACTGGCGGTTAACAGGAACTATGTGAGCCAGAGCGGGGAAAGGCCTACAGATTTTATACCCATCGTCACGT
GGAGAAAGCTGGCGGAAATCTGTGCTAACAATCTAAAAAAAGGGAGACTAGTAGCGGTTACAGGGAGTATACAGACAAGG
ACATGGGATGACAGCAGTGGTAACCGCCATTGGGTCACTGAAGTGGTAGCAGATGATGTGAGATTCTTAGAGCCTAAATC
TGGCTTTGGTAGTGGCAGCGCTCCAGAAGAGGAGAAAGAATTGGATGAAGATTTTGATAAGCTATTCGAAGACATCCCCG
ACGATTTTGATGGGTTTACGCCTATAGAGAGCGAAGATGACTTGCCTTTTTAA

Upstream 100 bases:

>100_bases
CGAATTGGAGAGAGTATATAGGATTACTGATGGAGTCTTGCGCTACCTTATAATAAGGACAGACGATTAATTTTTATTAA
TATAAAAAGGTGGGTTAAAA

Downstream 100 bases:

>100_bases
AGGAAGAAAGGAGGTTTGAAAGTGACGACGGCAAATACCAATGAAACTGCGGCAGCTGCAGCTGCTAAAAATAGAAGAAA
CAAAAAGAAAAAGAGAGTAT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MLNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEICANNLKKGRLVAVTGSIQTR
TWDDSSGNRHWVTEVVADDVRFLEPKSGFGSGSAPEEEKELDEDFDKLFEDIPDDFDGFTPIESEDDLPF

Sequences:

>Translated_150_residues
MLNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEICANNLKKGRLVAVTGSIQTR
TWDDSSGNRHWVTEVVADDVRFLEPKSGFGSGSAPEEEKELDEDFDKLFEDIPDDFDGFTPIESEDDLPF
>Mature_150_residues
MLNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEICANNLKKGRLVAVTGSIQTR
TWDDSSGNRHWVTEVVADDVRFLEPKSGFGSGSAPEEEKELDEDFDKLFEDIPDDFDGFTPIESEDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=117, Percent_Identity=35.042735042735, Blast_Score=72, Evalue=2e-14,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_THETN (Q8R6M2)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_624280.1
- ProteinModelPortal:   Q8R6M2
- SMR:   Q8R6M2
- GeneID:   996114
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE2780
- NMPDR:   fig|273068.3.peg.2361
- HOGENOM:   HBG755544
- OMA:   VARLTIA
- ProtClustDB:   CLSK901833
- BioCyc:   TTEN273068:TTE2780-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 16961; Mature: 16961

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEI
CCCCEEEEEECCCCHHHHHHCCCCCEEEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHH
CANNLKKGRLVAVTGSIQTRTWDDSSGNRHWVTEVVADDVRFLEPKSGFGSGSAPEEEKE
HHHCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
LDEDFDKLFEDIPDDFDGFTPIESEDDLPF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNKVILIGRLTKDPVMRYTSDMVPVTTFTLAVNRNYVSQSGERPTDFIPIVTWRKLAEI
CCCCEEEEEECCCCHHHHHHCCCCCEEEEEEEECCCHHHCCCCCCCCCCCHHHHHHHHHH
CANNLKKGRLVAVTGSIQTRTWDDSSGNRHWVTEVVADDVRFLEPKSGFGSGSAPEEEKE
HHHCCCCCEEEEEECCCEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHH
LDEDFDKLFEDIPDDFDGFTPIESEDDLPF
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336