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The map label for this gene is 20809100

Identifier: 20809100

GI number: 20809100

Start: 2661898

End: 2662863

Strand: Direct

Name: 20809100

Synonym: TTE2771

Alternate gene names: NA

Gene position: 2661898-2662863 (Clockwise)

Preceding gene: 20809097

Following gene: 20809113

Centisome position: 98.98

GC content: 31.68

Gene sequence:

>966_bases
ATGGATGGTTTCTATTATGATTTAGAAGCATTTGGTGAAGAACTTAAAAATATTCGCAAATCTCTGGGACTTTCCCAAAG
CGATGTTGCTGAACAAGCTTTCATCAGCAGGGATACACTTAGAAAAATTGAAAACGGTAAAGTCATACCCAAACAGGAAA
CTTTAGATCTTTTGTCCCATCTCTATAAAAAAGATTTAAATGAATTGCTCCTAAAATACAGATTAAAAGATTATTCTACT
TTCTTTGACATAAAATCCTCTCTCGAAAAGAAACTTGAAAGCGGAGATTTTGAAAGTTTGAGAGATGATATTGATAGGTT
AAAGAAATTGCTTGAAAAAGGTGATATGAGCCTATATTACTCTAAGTTATTAAATCAACTTTTACTAACTGCTGAGTCTG
TCTTTGAAAAAACAATCAATGAAAATTATGAAAAAGCTATGGAAAAGCTTCAAAAAGCGATGGAAATCACTATCCCAAAT
TTCTCTCTTTCTAATTATGCGGATTTTGTTTACAGTGACATGGAAATTCGAATTCTAATGAACATGGCTTTGCTCCTTAA
AAAAATAGAAGGTGCAGAAAAAAGCCTTGAAGTCCTCTTATTCTGCTTACATAATCTTTCTTCTGAAGAATGGGAAACGA
GAATAAGGTTGTATTACAATATATCATATACTTATCACATTCTTTCGCTTGACGAAGAAGCTTTACATTATGCAAATCTT
GGAATAGGAACCTGTGTAAAAAATAATATTTTAAGTGGTCTGGGACTTCTGTATTTTAGAAAAGCAATTGCAGAGTACAA
TCTCGGCAGAGAAGAATACAAAGACTCTTTATCTAAATCTATACATTTACTCGAAATAACTGGTCAGGAAAAACTTATAA
AGACGATTATGGAGTCCTGCAGGAAGTTCTATAATTTGGAAATTTCTAAGGAAAACAATATGCTTGTAATAAAAAGTCAT
GAATAA

Upstream 100 bases:

>100_bases
CCATCTTCACCTGCCCTTTACATTTTCTCCTTTTAACTATATAATAGATAATAACCAGGATATTTTCAAGCCGATTTGAA
TCGGCATGAGGTGTTAAAAA

Downstream 100 bases:

>100_bases
AACGAAATTTTTCTCTCTCATTTTTACATTTGACACCCAAAATTTCCAATTATTCTGTCACATCCATTGATGAGATAGTG
TCTTCTATCAAAGGACAAAA

Product: helix-turn-helix

Products: NA

Alternate protein names: Helix-Turn-Helix; XRE Family Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein

Number of amino acids: Translated: 321; Mature: 321

Protein sequence:

>321_residues
MDGFYYDLEAFGEELKNIRKSLGLSQSDVAEQAFISRDTLRKIENGKVIPKQETLDLLSHLYKKDLNELLLKYRLKDYST
FFDIKSSLEKKLESGDFESLRDDIDRLKKLLEKGDMSLYYSKLLNQLLLTAESVFEKTINENYEKAMEKLQKAMEITIPN
FSLSNYADFVYSDMEIRILMNMALLLKKIEGAEKSLEVLLFCLHNLSSEEWETRIRLYYNISYTYHILSLDEEALHYANL
GIGTCVKNNILSGLGLLYFRKAIAEYNLGREEYKDSLSKSIHLLEITGQEKLIKTIMESCRKFYNLEISKENNMLVIKSH
E

Sequences:

>Translated_321_residues
MDGFYYDLEAFGEELKNIRKSLGLSQSDVAEQAFISRDTLRKIENGKVIPKQETLDLLSHLYKKDLNELLLKYRLKDYST
FFDIKSSLEKKLESGDFESLRDDIDRLKKLLEKGDMSLYYSKLLNQLLLTAESVFEKTINENYEKAMEKLQKAMEITIPN
FSLSNYADFVYSDMEIRILMNMALLLKKIEGAEKSLEVLLFCLHNLSSEEWETRIRLYYNISYTYHILSLDEEALHYANL
GIGTCVKNNILSGLGLLYFRKAIAEYNLGREEYKDSLSKSIHLLEITGQEKLIKTIMESCRKFYNLEISKENNMLVIKSH
E
>Mature_321_residues
MDGFYYDLEAFGEELKNIRKSLGLSQSDVAEQAFISRDTLRKIENGKVIPKQETLDLLSHLYKKDLNELLLKYRLKDYST
FFDIKSSLEKKLESGDFESLRDDIDRLKKLLEKGDMSLYYSKLLNQLLLTAESVFEKTINENYEKAMEKLQKAMEITIPN
FSLSNYADFVYSDMEIRILMNMALLLKKIEGAEKSLEVLLFCLHNLSSEEWETRIRLYYNISYTYHILSLDEEALHYANL
GIGTCVKNNILSGLGLLYFRKAIAEYNLGREEYKDSLSKSIHLLEITGQEKLIKTIMESCRKFYNLEISKENNMLVIKSH
E

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37476; Mature: 37476

Theoretical pI: Translated: 5.36; Mature: 5.36

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDGFYYDLEAFGEELKNIRKSLGLSQSDVAEQAFISRDTLRKIENGKVIPKQETLDLLSH
CCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LYKKDLNELLLKYRLKDYSTFFDIKSSLEKKLESGDFESLRDDIDRLKKLLEKGDMSLYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
SKLLNQLLLTAESVFEKTINENYEKAMEKLQKAMEITIPNFSLSNYADFVYSDMEIRILM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH
NMALLLKKIEGAEKSLEVLLFCLHNLSSEEWETRIRLYYNISYTYHILSLDEEALHYANL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCEEEEEEEEEEEEEEEECCHHHHHHHCC
GIGTCVKNNILSGLGLLYFRKAIAEYNLGREEYKDSLSKSIHLLEITGQEKLIKTIMESC
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHH
RKFYNLEISKENNMLVIKSHE
HHHHCEEEECCCCEEEEECCC
>Mature Secondary Structure
MDGFYYDLEAFGEELKNIRKSLGLSQSDVAEQAFISRDTLRKIENGKVIPKQETLDLLSH
CCCEEHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
LYKKDLNELLLKYRLKDYSTFFDIKSSLEKKLESGDFESLRDDIDRLKKLLEKGDMSLYY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHH
SKLLNQLLLTAESVFEKTINENYEKAMEKLQKAMEITIPNFSLSNYADFVYSDMEIRILM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCHHHHHHH
NMALLLKKIEGAEKSLEVLLFCLHNLSSEEWETRIRLYYNISYTYHILSLDEEALHYANL
HHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHCEEEEEEEEEEEEEEEECCHHHHHHHCC
GIGTCVKNNILSGLGLLYFRKAIAEYNLGREEYKDSLSKSIHLLEITGQEKLIKTIMESC
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCEEEEEECCHHHHHHHHHHHH
RKFYNLEISKENNMLVIKSHE
HHHHCEEEECCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA