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The map label for this gene is 20809008

Identifier: 20809008

GI number: 20809008

Start: 2562915

End: 2563697

Strand: Reverse

Name: 20809008

Synonym: TTE2664

Alternate gene names: NA

Gene position: 2563697-2562915 (Counterclockwise)

Preceding gene: 20809009

Following gene: 20809007

Centisome position: 95.32

GC content: 40.36

Gene sequence:

>783_bases
ATGCAGCTTATTGTTACTTTTACTGCTTCTGGACCCATATTCCTACCGGTCCATTACGGGCATTTATTGCAAGCCCTTAT
TTACAATCAGATGGACAACCCCACTATACGCCACTACCTTCATGAACACGGCTTTCCTTTAGGGAAAAGGCATTTTAAAC
TTTTTACCTTTTCACGCCTTCAAGGGAGAGAGCTTACATACGAAAAAGAAAGTAAAAGGTTAATCTTTACCCCACCTTTG
AGGCTAGTAATTTGCTCTCCTCTTGATTTTCTCTTGCAAGAACTGGGGACAGGTTTTTTGCGTCAGGGTAAGGTGCGCAT
AGGGGAAGCAGTGCTGGAAGTTCAAAATATGTCTGTAGGTGCACAACAGGTTTTATCTACTTCTATAAGAGTGCGTATGT
TATCACCTTTGGTAGTTTACAGCACACTAGAAAAGGAGGGAGGGGATAGATACGTCTATTATTATACTCCTTTTGAAGAG
CGTTTCAGCCAGTTAGTGGGAGATAATTTGAAGAAAAAATATCTTATAGTTCATGGTAACTTTCCTTATTCATTGAATTT
TAATATACGCCCTTTAAGGGTCAGAGAGAAGGACTTCAAAGTTACTTATTTTAAAAACACAATAGTCAAGGGATGGATGG
GAGACTATGAGCTAGAAGGTGAACCTAAGCTTCTACAACTAGCTTTGGATGCAGGTTTAGGGTCGAAAAACTCACAGGGG
TACGGGTGTTGCAGATTGCTAGAGGAAGGGAAAACATATAAAGGAGGTGAAAAGAGTGGCTAA

Upstream 100 bases:

>100_bases
TTTGAAGTTGCAGAGATTATTAACTTACACCAAGTGAGGGAGGAGGCAAGGAGGAGAAGGTAAAAAAGAATAAATTGATG
AAACATTGGAGAGTGGAATC

Downstream 100 bases:

>100_bases
ACAAGAAAATAAAGCTAAAATTTCTATTGAGTTAGATTTGGACCATCCAACAGGTAATTTTTGGATAGACAATGGCTTAG
TTTATTTAGTAAACCAGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MQLIVTFTASGPIFLPVHYGHLLQALIYNQMDNPTIRHYLHEHGFPLGKRHFKLFTFSRLQGRELTYEKESKRLIFTPPL
RLVICSPLDFLLQELGTGFLRQGKVRIGEAVLEVQNMSVGAQQVLSTSIRVRMLSPLVVYSTLEKEGGDRYVYYYTPFEE
RFSQLVGDNLKKKYLIVHGNFPYSLNFNIRPLRVREKDFKVTYFKNTIVKGWMGDYELEGEPKLLQLALDAGLGSKNSQG
YGCCRLLEEGKTYKGGEKSG

Sequences:

>Translated_260_residues
MQLIVTFTASGPIFLPVHYGHLLQALIYNQMDNPTIRHYLHEHGFPLGKRHFKLFTFSRLQGRELTYEKESKRLIFTPPL
RLVICSPLDFLLQELGTGFLRQGKVRIGEAVLEVQNMSVGAQQVLSTSIRVRMLSPLVVYSTLEKEGGDRYVYYYTPFEE
RFSQLVGDNLKKKYLIVHGNFPYSLNFNIRPLRVREKDFKVTYFKNTIVKGWMGDYELEGEPKLLQLALDAGLGSKNSQG
YGCCRLLEEGKTYKGGEKSG
>Mature_260_residues
MQLIVTFTASGPIFLPVHYGHLLQALIYNQMDNPTIRHYLHEHGFPLGKRHFKLFTFSRLQGRELTYEKESKRLIFTPPL
RLVICSPLDFLLQELGTGFLRQGKVRIGEAVLEVQNMSVGAQQVLSTSIRVRMLSPLVVYSTLEKEGGDRYVYYYTPFEE
RFSQLVGDNLKKKYLIVHGNFPYSLNFNIRPLRVREKDFKVTYFKNTIVKGWMGDYELEGEPKLLQLALDAGLGSKNSQG
YGCCRLLEEGKTYKGGEKSG

Specific function: Unknown

COG id: COG1583

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010156
- InterPro:   IPR002743 [H]

Pfam domain/function: PF01881 DUF57 [H]

EC number: NA

Molecular weight: Translated: 29841; Mature: 29841

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLIVTFTASGPIFLPVHYGHLLQALIYNQMDNPTIRHYLHEHGFPLGKRHFKLFTFSRL
CEEEEEEECCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEECC
QGRELTYEKESKRLIFTPPLRLVICSPLDFLLQELGTGFLRQGKVRIGEAVLEVQNMSVG
CCCCCCEECCCCEEEECCCEEEEEECCHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCC
AQQVLSTSIRVRMLSPLVVYSTLEKEGGDRYVYYYTPFEERFSQLVGDNLKKKYLIVHGN
HHHHHHHHHHHEECCHHHEEEHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEEEECC
FPYSLNFNIRPLRVREKDFKVTYFKNTIVKGWMGDYELEGEPKLLQLALDAGLGSKNSQG
CCEEEECCEEEEEEECCCEEEEEEECCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCC
YGCCRLLEEGKTYKGGEKSG
HHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQLIVTFTASGPIFLPVHYGHLLQALIYNQMDNPTIRHYLHEHGFPLGKRHFKLFTFSRL
CEEEEEEECCCCEEEEECHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCEEEEEEEECC
QGRELTYEKESKRLIFTPPLRLVICSPLDFLLQELGTGFLRQGKVRIGEAVLEVQNMSVG
CCCCCCEECCCCEEEECCCEEEEEECCHHHHHHHHCCHHHHCCCHHHHHHHHHHHCCCCC
AQQVLSTSIRVRMLSPLVVYSTLEKEGGDRYVYYYTPFEERFSQLVGDNLKKKYLIVHGN
HHHHHHHHHHHEECCHHHEEEHHHCCCCCEEEEEECCHHHHHHHHHCCCCCEEEEEEECC
FPYSLNFNIRPLRVREKDFKVTYFKNTIVKGWMGDYELEGEPKLLQLALDAGLGSKNSQG
CCEEEECCEEEEEEECCCEEEEEEECCCCCCCCCCEEECCCCCEEEEEEECCCCCCCCCC
YGCCRLLEEGKTYKGGEKSG
HHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]