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The map label for this gene is 20809003

Identifier: 20809003

GI number: 20809003

Start: 2556951

End: 2557463

Strand: Reverse

Name: 20809003

Synonym: TTE2659

Alternate gene names: NA

Gene position: 2557463-2556951 (Counterclockwise)

Preceding gene: 20809004

Following gene: 20809002

Centisome position: 95.09

GC content: 37.23

Gene sequence:

>513_bases
ATGAGCATGCCTTTTTTAACTCCCCGTGTTGTAGGGAGCATAGTCAATGCTTACATTATATGTCCTCGTAAAGCTTGGCT
CATGTCCAGACAAATTTTTCCTGATGAAGATTATGTTTATCTTCACTTAGGGCGCTTAATCCAAGAACAGAGTTATAGTC
GAGAGAAAAAAGAAATTCACTTAGAGCATCTTCGCATAGATTTGGTACGAAAAGAAGGAGAAACATTGGTAATAGCTGAG
GTAAAAAAATCTTCACGGGGCAAAGAAGCAGCTAGAATGCAATTAGCCTTTTATCTTTATGAATTAAAAACCATGAGTAT
AGAGGCAAAAGGAGAACTTCTTTTTCCTGAAGAGAGGAGGCGGGAGGAGATGATTTTAGATGAAAAATGGATGAAAAAGA
TAGAAGAGACAAAGGAGAAAATAGAAAATTTAATCCAACATGAATTACCTCCTCCTCCCAAATATTCTTCCTATTGTAAC
AAGTGTGCCTACGGAGAGTTTTGTTGGGCATAA

Upstream 100 bases:

>100_bases
TGCGGAGATATGTTAAAAAGGATATGCTGGAAAGAAAATCTGCAAGGGAATTTTAAATAATATTAAAAGGTGAATGAAGT
TAAATTTAAGGAGTGTCTGT

Downstream 100 bases:

>100_bases
AATGTATAGAATGACAAAGAGAGAGGTGGGAATATTTGCAGAAGACCCTTTACCTTTTTGCTAATGGTAAGTTGTATCGA
AAAGATAACACTATCTGTGT

Product: endonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 169

Protein sequence:

>170_residues
MSMPFLTPRVVGSIVNAYIICPRKAWLMSRQIFPDEDYVYLHLGRLIQEQSYSREKKEIHLEHLRIDLVRKEGETLVIAE
VKKSSRGKEAARMQLAFYLYELKTMSIEAKGELLFPEERRREEMILDEKWMKKIEETKEKIENLIQHELPPPPKYSSYCN
KCAYGEFCWA

Sequences:

>Translated_170_residues
MSMPFLTPRVVGSIVNAYIICPRKAWLMSRQIFPDEDYVYLHLGRLIQEQSYSREKKEIHLEHLRIDLVRKEGETLVIAE
VKKSSRGKEAARMQLAFYLYELKTMSIEAKGELLFPEERRREEMILDEKWMKKIEETKEKIENLIQHELPPPPKYSSYCN
KCAYGEFCWA
>Mature_169_residues
SMPFLTPRVVGSIVNAYIICPRKAWLMSRQIFPDEDYVYLHLGRLIQEQSYSREKKEIHLEHLRIDLVRKEGETLVIAEV
KKSSRGKEAARMQLAFYLYELKTMSIEAKGELLFPEERRREEMILDEKWMKKIEETKEKIENLIQHELPPPPKYSSYCNK
CAYGEFCWA

Specific function: Unknown

COG id: COG1468

COG function: function code L; RecB family exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013343
- InterPro:   IPR022765 [H]

Pfam domain/function: PF01930 DUF83 [H]

EC number: NA

Molecular weight: Translated: 20219; Mature: 20088

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPFLTPRVVGSIVNAYIICPRKAWLMSRQIFPDEDYVYLHLGRLIQEQSYSREKKEIH
CCCCCCCHHHHHHHHHHHEECCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
LEHLRIDLVRKEGETLVIAEVKKSSRGKEAARMQLAFYLYELKTMSIEAKGELLFPEERR
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCEECCHHHH
REEMILDEKWMKKIEETKEKIENLIQHELPPPPKYSSYCNKCAYGEFCWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
SMPFLTPRVVGSIVNAYIICPRKAWLMSRQIFPDEDYVYLHLGRLIQEQSYSREKKEIH
CCCCCCHHHHHHHHHHHEECCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHH
LEHLRIDLVRKEGETLVIAEVKKSSRGKEAARMQLAFYLYELKTMSIEAKGELLFPEERR
HHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHEEEECCCCEECCHHHH
REEMILDEKWMKKIEETKEKIENLIQHELPPPPKYSSYCNKCAYGEFCWA
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]