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The map label for this gene is 20808984

Identifier: 20808984

GI number: 20808984

Start: 2533121

End: 2535850

Strand: Reverse

Name: 20808984

Synonym: TTE2639

Alternate gene names: NA

Gene position: 2535850-2533121 (Counterclockwise)

Preceding gene: 20808985

Following gene: 20808983

Centisome position: 94.29

GC content: 35.42

Gene sequence:

>2730_bases
ATGGAAAAAGTATGGCTTCTGAAACTTAAAGCTTTTCTTCATGACCCTCCTCATAAGCATTGGATAATTTCTATGGACAA
TGAAGAATGTATAAAAAAGTTCCAGCTTCAGGAAAAAGGTCGATGCCATGAGATTTTAATTAAATCTAAAGTAATTGAAC
CACTTCTTGGAGAAGATTTAACAGAGGAAGAAGAGAAACTTATTGAAAAAGCAGATACACAAGCTTATCCTGTAAATAGA
ATACTTCCCCCAGTGGCTGTTAAAATAAGAGGAGAAGATGTGATATTTTTTGACATGTTTAATAAAAAAATATATTACGA
TATACTGGCAGAAACAGATTATGAAACTGAGAATAAGCGTTTTTTAGAATTAGTAGAGAAGCTTGCAAAGAATTATAACC
TTTCTAGGATAAAGGAAGAAGAAAAAAAAGAAAAAGCCAAAATCTTGCTTTTATTTCTATGGAGATTCTACCAAGAAATT
TTTCACTGGATGAGAATCCATCCTGCAGATACAAGGGCGCCCAATCACTCCATCTATGATCACCTTGTCCAAACTTCTAC
TCTGGTTTCAGCACTTCCCAAACCAGCATTTTTGCTCTTTACAATTGGCCCTGTTCAGAGCTTTATTGCTACGGCGAGAA
AAACTTCTGATTTATGGGCTGGAAGTTATATGCTTTCTTACTTTATATGGAAAATCATGAAGTTTGTAGTTGAACGTTAT
GGGGCAGATGTGATTGTGTACCCAAATCTTTTAGGTCAACCTCTTGTAGATTTATGGCTTAGTTCGGAGGTATTTGGTAA
TTCGCTTACTCATTTATCACAAAAGGAATTTGATGAATGGTTTAAAGAGTGGAATAACATTCCAAGGTCTAAGGGTTTGG
AAGAAAAGTTGACTATTGCCAATATGCCCAACAGATTTCTTGCAATTGCGCCAATTAATGAAGGTGAAGCTTTAAAACTG
GGCGAAGAGTGCGAGAAAAACTTTAAAGAACAACTAAAGAGCCTAGCAAAAAAGACAGTGAAAAGATTAGAAAGTATTTT
AAATCTAGAGGGGGATTTAGAGAAAATTCAATTGCAGATTGAAAATCAGCTATTAAATTATTTCCAGGTTTACTGGGCGG
TTATGCCATGGTTTGAAGAGAAAGAGTCTCCAAAAGAGGTTTTGGATGATTACAAAGAAATAATAGGAGAGACAGAGCTT
TACAAAACGATAAGTGAGTTTATAGAATCTGTTCCTAAGATATGGAGTAAAAATAAAGAAAAAGATGAGGAATACAGAGA
TTTTAGCATAGCCTATTCATTACTTCTTGAGCTAACTGAAAAATTGCTTGGAGCGAGGAAGAGCATAAGGGAATTTGAAC
AGTTAGAACAAAAAGGGCGTAAGTGCAGTTTATGTGGAGAGTTTGAAGTTTTGCCATTAGATTGGGAAAAATTGAGGAGT
AAGGAAAAAGGCTTGGTAAAAGAAAAAGAGCAACTCTGTGGAGTGTGTCTTGCAAAGCGATTATTCCCAAAGGTAATGAA
GGAAGAGCTAAATCTTTCCGAAGAAATGAAATTTCCCTCAACTTCTGAAATGGCAACTATTGGAGAAAAAAGGAGAATTG
CTGACAACAAAGAGTTTATTGCAGAGTTCAAGGAATTATTTGGAGAATTTAAACAGAAGCTTTTGCTTCCCAATACTGTT
TCTGTTCCGAAATTAAAAGATAACCAACTTTTTGAAATAGATGGACAGTGGTTGATGAGGGAGAGTTATAGAGAAGAATA
TATTAAAAGTGAGCATACAGAGAACTTCAAAGTAGAGGAATTTCAGAAGATGTCTCAGAAAATAACAAAGCTTTTAGAAA
AACACAGGGTCAACCCTTCCAGATATTATGCTATTCTTCAAATGGATGGGGACCACATGGGGAAGTGGTTAAAAGGAGAG
AATAATCCACCTATAATGGAAACTTTACACCCCAAAGTGGGAGAACATATAAAACAACATGCAAAAGATAACCTATCTTC
GATACTTTGTAAGAAACACCCTACTACTCCTTCTCTTCACCAGACCTTGAGTAGGAAAATTTCCACGTTTGCTCTTCAAG
AAGTGCGAAGAATTGTAGAAGAAACACATTACGGGAAATTGGTTTATGCAGGAGGAGATGACGTTCTAGCATTACTTCCT
GTAGAAGAGGTGTTGGAATGTGCTTATGAATTGCAGAACGCTTTTAAAGAAGTTTTAAGTTCTGAAGCCTCCATGAGTGC
AGGCATTGTAATAGTTCATCACAAATATCCTCTTTACCTTGCCTTGAAAGAGGTTCAATTGGCTCAGAAGAAAGCAAAAG
ACGAAAGACAGTATAATAGAAATGCTTTTTGCCTTAAGTTTATAAAAGGAAGTGGAGCACTAAAAGAATGCGGGGGCAAA
TGGGCGTTGATGGATTTTTTGAGAGAACTCATAGAGCATTTCAAGAAAGGAGAATTTTCATCCACTTTTCCCTATCAATT
TTTTGAGGTAGTAGACAGATTGTATGATGACGAAAATAAAGAACAAATTATTGGGATTTTGAGAAATGAATTAAAGAGAA
TATTTCTTCGTCAGAGTGGAAACAGAGATATTTTAGAAAAATATGCTAGTGAGATATTGCTCCCAAAGTTTGATGAGATA
GTTAAAGAAACGCCAGATAGAGTGATAGATTTTGCTAATATGTTGATTATAGCAAGGTCAATTGCAATGGAGCATTCCTG
TAATGAATAA

Upstream 100 bases:

>100_bases
CAATTGATGTAGAATTATACATAGTAAAAAGCAGAACTGTTAGATGATAATTATACAAAATTTTCTTTTTTGAAGTTTAG
AAAAAGTGAGGGAGAAAAAG

Downstream 100 bases:

>100_bases
AAAATAAGGGAGAATGGACTTTGAAAAAATAAGTACCTCCTGATAAAATACAGAGTGTAAGTTTAAGAACTTACCTCGAA
TTATCAAAATAAACAGGAGG

Product: hydrolase

Products: NA

Alternate protein names: CRISPR-Associated RAMP Crm2 Family Protein; Crm2 Family CRISPR-Associated Protein; Hydrolase; CRISPR-Associated Cmr2 Family Protein; HD Superfamily Hydrolase; Crispr-Associated Protein Crm2 Family; Cmr2 Family CRISPR-Associated Protein; HD Family Hydrolase

Number of amino acids: Translated: 909; Mature: 909

Protein sequence:

>909_residues
MEKVWLLKLKAFLHDPPHKHWIISMDNEECIKKFQLQEKGRCHEILIKSKVIEPLLGEDLTEEEEKLIEKADTQAYPVNR
ILPPVAVKIRGEDVIFFDMFNKKIYYDILAETDYETENKRFLELVEKLAKNYNLSRIKEEEKKEKAKILLLFLWRFYQEI
FHWMRIHPADTRAPNHSIYDHLVQTSTLVSALPKPAFLLFTIGPVQSFIATARKTSDLWAGSYMLSYFIWKIMKFVVERY
GADVIVYPNLLGQPLVDLWLSSEVFGNSLTHLSQKEFDEWFKEWNNIPRSKGLEEKLTIANMPNRFLAIAPINEGEALKL
GEECEKNFKEQLKSLAKKTVKRLESILNLEGDLEKIQLQIENQLLNYFQVYWAVMPWFEEKESPKEVLDDYKEIIGETEL
YKTISEFIESVPKIWSKNKEKDEEYRDFSIAYSLLLELTEKLLGARKSIREFEQLEQKGRKCSLCGEFEVLPLDWEKLRS
KEKGLVKEKEQLCGVCLAKRLFPKVMKEELNLSEEMKFPSTSEMATIGEKRRIADNKEFIAEFKELFGEFKQKLLLPNTV
SVPKLKDNQLFEIDGQWLMRESYREEYIKSEHTENFKVEEFQKMSQKITKLLEKHRVNPSRYYAILQMDGDHMGKWLKGE
NNPPIMETLHPKVGEHIKQHAKDNLSSILCKKHPTTPSLHQTLSRKISTFALQEVRRIVEETHYGKLVYAGGDDVLALLP
VEEVLECAYELQNAFKEVLSSEASMSAGIVIVHHKYPLYLALKEVQLAQKKAKDERQYNRNAFCLKFIKGSGALKECGGK
WALMDFLRELIEHFKKGEFSSTFPYQFFEVVDRLYDDENKEQIIGILRNELKRIFLRQSGNRDILEKYASEILLPKFDEI
VKETPDRVIDFANMLIIARSIAMEHSCNE

Sequences:

>Translated_909_residues
MEKVWLLKLKAFLHDPPHKHWIISMDNEECIKKFQLQEKGRCHEILIKSKVIEPLLGEDLTEEEEKLIEKADTQAYPVNR
ILPPVAVKIRGEDVIFFDMFNKKIYYDILAETDYETENKRFLELVEKLAKNYNLSRIKEEEKKEKAKILLLFLWRFYQEI
FHWMRIHPADTRAPNHSIYDHLVQTSTLVSALPKPAFLLFTIGPVQSFIATARKTSDLWAGSYMLSYFIWKIMKFVVERY
GADVIVYPNLLGQPLVDLWLSSEVFGNSLTHLSQKEFDEWFKEWNNIPRSKGLEEKLTIANMPNRFLAIAPINEGEALKL
GEECEKNFKEQLKSLAKKTVKRLESILNLEGDLEKIQLQIENQLLNYFQVYWAVMPWFEEKESPKEVLDDYKEIIGETEL
YKTISEFIESVPKIWSKNKEKDEEYRDFSIAYSLLLELTEKLLGARKSIREFEQLEQKGRKCSLCGEFEVLPLDWEKLRS
KEKGLVKEKEQLCGVCLAKRLFPKVMKEELNLSEEMKFPSTSEMATIGEKRRIADNKEFIAEFKELFGEFKQKLLLPNTV
SVPKLKDNQLFEIDGQWLMRESYREEYIKSEHTENFKVEEFQKMSQKITKLLEKHRVNPSRYYAILQMDGDHMGKWLKGE
NNPPIMETLHPKVGEHIKQHAKDNLSSILCKKHPTTPSLHQTLSRKISTFALQEVRRIVEETHYGKLVYAGGDDVLALLP
VEEVLECAYELQNAFKEVLSSEASMSAGIVIVHHKYPLYLALKEVQLAQKKAKDERQYNRNAFCLKFIKGSGALKECGGK
WALMDFLRELIEHFKKGEFSSTFPYQFFEVVDRLYDDENKEQIIGILRNELKRIFLRQSGNRDILEKYASEILLPKFDEI
VKETPDRVIDFANMLIIARSIAMEHSCNE
>Mature_909_residues
MEKVWLLKLKAFLHDPPHKHWIISMDNEECIKKFQLQEKGRCHEILIKSKVIEPLLGEDLTEEEEKLIEKADTQAYPVNR
ILPPVAVKIRGEDVIFFDMFNKKIYYDILAETDYETENKRFLELVEKLAKNYNLSRIKEEEKKEKAKILLLFLWRFYQEI
FHWMRIHPADTRAPNHSIYDHLVQTSTLVSALPKPAFLLFTIGPVQSFIATARKTSDLWAGSYMLSYFIWKIMKFVVERY
GADVIVYPNLLGQPLVDLWLSSEVFGNSLTHLSQKEFDEWFKEWNNIPRSKGLEEKLTIANMPNRFLAIAPINEGEALKL
GEECEKNFKEQLKSLAKKTVKRLESILNLEGDLEKIQLQIENQLLNYFQVYWAVMPWFEEKESPKEVLDDYKEIIGETEL
YKTISEFIESVPKIWSKNKEKDEEYRDFSIAYSLLLELTEKLLGARKSIREFEQLEQKGRKCSLCGEFEVLPLDWEKLRS
KEKGLVKEKEQLCGVCLAKRLFPKVMKEELNLSEEMKFPSTSEMATIGEKRRIADNKEFIAEFKELFGEFKQKLLLPNTV
SVPKLKDNQLFEIDGQWLMRESYREEYIKSEHTENFKVEEFQKMSQKITKLLEKHRVNPSRYYAILQMDGDHMGKWLKGE
NNPPIMETLHPKVGEHIKQHAKDNLSSILCKKHPTTPSLHQTLSRKISTFALQEVRRIVEETHYGKLVYAGGDDVLALLP
VEEVLECAYELQNAFKEVLSSEASMSAGIVIVHHKYPLYLALKEVQLAQKKAKDERQYNRNAFCLKFIKGSGALKECGGK
WALMDFLRELIEHFKKGEFSSTFPYQFFEVVDRLYDDENKEQIIGILRNELKRIFLRQSGNRDILEKYASEILLPKFDEI
VKETPDRVIDFANMLIIARSIAMEHSCNE

Specific function: Unknown

COG id: COG1353

COG function: function code R; Predicted hydrolase of the HD superfamily (permuted catalytic motifs)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 106576; Mature: 106576

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKVWLLKLKAFLHDPPHKHWIISMDNEECIKKFQLQEKGRCHEILIKSKVIEPLLGEDL
CCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
TEEEEKLIEKADTQAYPVNRILPPVAVKIRGEDVIFFDMFNKKIYYDILAETDYETENKR
CHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCEEEEEEECCCEEEEHHHHCCCCCCCHHH
FLELVEKLAKNYNLSRIKEEEKKEKAKILLLFLWRFYQEIFHWMRIHPADTRAPNHSIYD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
HLVQTSTLVSALPKPAFLLFTIGPVQSFIATARKTSDLWAGSYMLSYFIWKIMKFVVERY
HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GADVIVYPNLLGQPLVDLWLSSEVFGNSLTHLSQKEFDEWFKEWNNIPRSKGLEEKLTIA
CCCEEEECCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC
NMPNRFLAIAPINEGEALKLGEECEKNFKEQLKSLAKKTVKRLESILNLEGDLEKIQLQI
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ENQLLNYFQVYWAVMPWFEEKESPKEVLDDYKEIIGETELYKTISEFIESVPKIWSKNKE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
KDEEYRDFSIAYSLLLELTEKLLGARKSIREFEQLEQKGRKCSLCGEFEVLPLDWEKLRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEECCCHHHHCC
KEKGLVKEKEQLCGVCLAKRLFPKVMKEELNLSEEMKFPSTSEMATIGEKRRIADNKEFI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHH
AEFKELFGEFKQKLLLPNTVSVPKLKDNQLFEIDGQWLMRESYREEYIKSEHTENFKVEE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHH
FQKMSQKITKLLEKHRVNPSRYYAILQMDGDHMGKWLKGENNPPIMETLHPKVGEHIKQH
HHHHHHHHHHHHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
AKDNLSSILCKKHPTTPSLHQTLSRKISTFALQEVRRIVEETHYGKLVYAGGDDVLALLP
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECC
VEEVLECAYELQNAFKEVLSSEASMSAGIVIVHHKYPLYLALKEVQLAQKKAKDERQYNR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
NAFCLKFIKGSGALKECGGKWALMDFLRELIEHFKKGEFSSTFPYQFFEVVDRLYDDENK
CCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCH
EQIIGILRNELKRIFLRQSGNRDILEKYASEILLPKFDEIVKETPDRVIDFANMLIIARS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHH
IAMEHSCNE
HHHHCCCCC
>Mature Secondary Structure
MEKVWLLKLKAFLHDPPHKHWIISMDNEECIKKFQLQEKGRCHEILIKSKVIEPLLGEDL
CCCHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCC
TEEEEKLIEKADTQAYPVNRILPPVAVKIRGEDVIFFDMFNKKIYYDILAETDYETENKR
CHHHHHHHHHHCCCCCCHHHCCCCCEEEECCCEEEEEEECCCEEEEHHHHCCCCCCCHHH
FLELVEKLAKNYNLSRIKEEEKKEKAKILLLFLWRFYQEIFHWMRIHPADTRAPNHSIYD
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHH
HLVQTSTLVSALPKPAFLLFTIGPVQSFIATARKTSDLWAGSYMLSYFIWKIMKFVVERY
HHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GADVIVYPNLLGQPLVDLWLSSEVFGNSLTHLSQKEFDEWFKEWNNIPRSKGLEEKLTIA
CCCEEEECCHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHC
NMPNRFLAIAPINEGEALKLGEECEKNFKEQLKSLAKKTVKRLESILNLEGDLEKIQLQI
CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
ENQLLNYFQVYWAVMPWFEEKESPKEVLDDYKEIIGETELYKTISEFIESVPKIWSKNKE
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
KDEEYRDFSIAYSLLLELTEKLLGARKSIREFEQLEQKGRKCSLCGEFEVLPLDWEKLRS
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEECCCHHHHCC
KEKGLVKEKEQLCGVCLAKRLFPKVMKEELNLSEEMKFPSTSEMATIGEKRRIADNKEFI
HHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHCCCHHHH
AEFKELFGEFKQKLLLPNTVSVPKLKDNQLFEIDGQWLMRESYREEYIKSEHTENFKVEE
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCCHHH
FQKMSQKITKLLEKHRVNPSRYYAILQMDGDHMGKWLKGENNPPIMETLHPKVGEHIKQH
HHHHHHHHHHHHHHHCCCHHHEEEEEEECCHHHHHHHCCCCCCCHHHHCCHHHHHHHHHH
AKDNLSSILCKKHPTTPSLHQTLSRKISTFALQEVRRIVEETHYGKLVYAGGDDVLALLP
HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEECC
VEEVLECAYELQNAFKEVLSSEASMSAGIVIVHHKYPLYLALKEVQLAQKKAKDERQYNR
HHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCC
NAFCLKFIKGSGALKECGGKWALMDFLRELIEHFKKGEFSSTFPYQFFEVVDRLYDDENK
CCEEEEEECCCCCHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCH
EQIIGILRNELKRIFLRQSGNRDILEKYASEILLPKFDEIVKETPDRVIDFANMLIIARS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHH
IAMEHSCNE
HHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA