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The map label for this gene is 20808978

Identifier: 20808978

GI number: 20808978

Start: 2524876

End: 2525925

Strand: Reverse

Name: 20808978

Synonym: TTE2633

Alternate gene names: NA

Gene position: 2525925-2524876 (Counterclockwise)

Preceding gene: 20808979

Following gene: 20808977

Centisome position: 93.92

GC content: 34.95

Gene sequence:

>1050_bases
ATGTATAAAGAAGCTGCTTTGATTACATTTTATGCTGAAACTCCTGTTCATATGGGCGCAGGGCAGAGCGTATCTTATGT
GGACCTGCCAATCCAGAGGGAAAGACATACTGCTTTCCCAATTTTCTGGTCTAGCGGAATCAAAGGAGTTATAAGGGATA
CTTGCTACAGAATTTGGAAAGACAAAGATAAAGTGAATCTTATATTTGGTCCAGAGGAAGATTCTGACTTTGCTAGCTGT
ATAAGCATTACAGATGCAAAGATTTTGCTGTATCCGGTTCGTTCTGTTAGAGGCGTGTGTGCATGGATTACCTGTCCTTT
TGTATTGAAGAGATTTAAAGAAGAATTGGAAAGTGCAGGAATAAATGAAGTTAATAAAAATTTCGAAGTGATTGATAATT
TACACTTAAAAGATGGAGAGGCAGTGATTCCAAAAGAAAGTATTTCAGTTTTAGGGATAAATGATAAACAAGTGGCTTTT
GAAGAGTTTGTATTTTCTATGAAAAACACGTCGGAGAATATTTCAGAAGTTGTCAAGTTTATAAAAAACTTGCTTCCTGA
TACTTCCCTTACAACAGATATTGAAAAACATTTTGCCATTGTATCAGATGACACGTTTAGAGATTTTGTAAATTATGCTG
TTGAAGTGAGGACAAGAGTGAGAATTGACCAAAAGACAGGGACAGTGAAGGAGGGAGCATTGTTTACTGAGGAACTCATA
CCCTCTGAGAGCGTATTTTATTCACTTTTATTTATTAGTGACCCTTATTTTGGAATAGATGATGAATTTTATAGCTGCCT
TCTTGAAGTGAAAGAAAAGACCCAGGGAAAACTTAACTGGGAAGAAGCAAAGAATAAGATTGAGAAAAAAGAATGGCTGG
AAAAGGTAAAAAATAAAGAATTTTATCTTAAAAAAGCTTGGGAAGGGAATTATTTTAACTCTGCAGAAGTTTTAAATAAT
TTGCATGAAATATTAAATGGAACTATTCTTCAGCTTGGAGGAGATGAAACTACAGGGAAAGGGTTTATGAGGGTGAAAAT
TTCTCTTTAA

Upstream 100 bases:

>100_bases
ATTGTACCTGAGGGCAATTATCATTCTTTTAAAATTCCAAGTGGTGAGCAAGAATTTATTGGCTCTAATCTAATTCTCAT
TGGCAAGGAGGAGGTAAAAG

Downstream 100 bases:

>100_bases
TCTCTAAAAAGGAGGACGAGAAAGGTGGTTGAAGGTTTAAAAGTTAAAACACTTGAGCAAGAAAGAGCAAGTTTTTGCCT
TAAAGAAATAGAAGAATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: CRISPR-Associated RAMP Cmr4 Family Protein Family Protein; Cmr4 Family CRISPR-Associated RAMP Protein; CRISPR-Associated RAMP Cmr4 Family Protein; CRISPR-Associated Ramp Protein Cmr4 Family; Crispr-Associated Ramp Protein Cmr4 Family; CRISPR-Associated RAMP Protein; Cmr Crispr-Associated Ramp Protein Cmr4 Family; RAMP Superfamily DNA Repair Protein

Number of amino acids: Translated: 349; Mature: 349

Protein sequence:

>349_residues
MYKEAALITFYAETPVHMGAGQSVSYVDLPIQRERHTAFPIFWSSGIKGVIRDTCYRIWKDKDKVNLIFGPEEDSDFASC
ISITDAKILLYPVRSVRGVCAWITCPFVLKRFKEELESAGINEVNKNFEVIDNLHLKDGEAVIPKESISVLGINDKQVAF
EEFVFSMKNTSENISEVVKFIKNLLPDTSLTTDIEKHFAIVSDDTFRDFVNYAVEVRTRVRIDQKTGTVKEGALFTEELI
PSESVFYSLLFISDPYFGIDDEFYSCLLEVKEKTQGKLNWEEAKNKIEKKEWLEKVKNKEFYLKKAWEGNYFNSAEVLNN
LHEILNGTILQLGGDETTGKGFMRVKISL

Sequences:

>Translated_349_residues
MYKEAALITFYAETPVHMGAGQSVSYVDLPIQRERHTAFPIFWSSGIKGVIRDTCYRIWKDKDKVNLIFGPEEDSDFASC
ISITDAKILLYPVRSVRGVCAWITCPFVLKRFKEELESAGINEVNKNFEVIDNLHLKDGEAVIPKESISVLGINDKQVAF
EEFVFSMKNTSENISEVVKFIKNLLPDTSLTTDIEKHFAIVSDDTFRDFVNYAVEVRTRVRIDQKTGTVKEGALFTEELI
PSESVFYSLLFISDPYFGIDDEFYSCLLEVKEKTQGKLNWEEAKNKIEKKEWLEKVKNKEFYLKKAWEGNYFNSAEVLNN
LHEILNGTILQLGGDETTGKGFMRVKISL
>Mature_349_residues
MYKEAALITFYAETPVHMGAGQSVSYVDLPIQRERHTAFPIFWSSGIKGVIRDTCYRIWKDKDKVNLIFGPEEDSDFASC
ISITDAKILLYPVRSVRGVCAWITCPFVLKRFKEELESAGINEVNKNFEVIDNLHLKDGEAVIPKESISVLGINDKQVAF
EEFVFSMKNTSENISEVVKFIKNLLPDTSLTTDIEKHFAIVSDDTFRDFVNYAVEVRTRVRIDQKTGTVKEGALFTEELI
PSESVFYSLLFISDPYFGIDDEFYSCLLEVKEKTQGKLNWEEAKNKIEKKEWLEKVKNKEFYLKKAWEGNYFNSAEVLNN
LHEILNGTILQLGGDETTGKGFMRVKISL

Specific function: Unknown

COG id: COG1336

COG function: function code L; Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39961; Mature: 39961

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKEAALITFYAETPVHMGAGQSVSYVDLPIQRERHTAFPIFWSSGIKGVIRDTCYRIWK
CCCCEEEEEEEECCCEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHC
DKDKVNLIFGPEEDSDFASCISITDAKILLYPVRSVRGVCAWITCPFVLKRFKEELESAG
CCCCEEEEECCCCCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
INEVNKNFEVIDNLHLKDGEAVIPKESISVLGINDKQVAFEEFVFSMKNTSENISEVVKF
CCHHCCCHHHHCCCEECCCCEECCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH
IKNLLPDTSLTTDIEKHFAIVSDDTFRDFVNYAVEVRTRVRIDQKTGTVKEGALFTEELI
HHHHCCCCCCHHHHHHHEEEECCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHC
PSESVFYSLLFISDPYFGIDDEFYSCLLEVKEKTQGKLNWEEAKNKIEKKEWLEKVKNKE
CCHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
FYLKKAWEGNYFNSAEVLNNLHEILNGTILQLGGDETTGKGFMRVKISL
EEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MYKEAALITFYAETPVHMGAGQSVSYVDLPIQRERHTAFPIFWSSGIKGVIRDTCYRIWK
CCCCEEEEEEEECCCEECCCCCCCEEEECCCCCCCCCCCEEEECCCCCHHHHHHHHHHHC
DKDKVNLIFGPEEDSDFASCISITDAKILLYPVRSVRGVCAWITCPFVLKRFKEELESAG
CCCCEEEEECCCCCCCHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC
INEVNKNFEVIDNLHLKDGEAVIPKESISVLGINDKQVAFEEFVFSMKNTSENISEVVKF
CCHHCCCHHHHCCCEECCCCEECCCCCEEEEECCCHHHHHHHHHHHHHCCHHHHHHHHHH
IKNLLPDTSLTTDIEKHFAIVSDDTFRDFVNYAVEVRTRVRIDQKTGTVKEGALFTEELI
HHHHCCCCCCHHHHHHHEEEECCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHHHC
PSESVFYSLLFISDPYFGIDDEFYSCLLEVKEKTQGKLNWEEAKNKIEKKEWLEKVKNKE
CCHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCC
FYLKKAWEGNYFNSAEVLNNLHEILNGTILQLGGDETTGKGFMRVKISL
EEEEECCCCCCCCHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA