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The map label for this gene is DppC6 [H]

Identifier: 20808878

GI number: 20808878

Start: 2415253

End: 2416170

Strand: Direct

Name: DppC6 [H]

Synonym: TTE2524

Alternate gene names: 20808878

Gene position: 2415253-2416170 (Clockwise)

Preceding gene: 20808877

Following gene: 20808879

Centisome position: 89.8

GC content: 42.7

Gene sequence:

>918_bases
TTGGAGAGGTTAACTCCAACACTTGACTATAGAAAAAATCGCAAAAAAGGCGGTACTTCACTGTGGCAAGATGCCTTTCG
CCGCTTTATAAGGAACAAATACGCTATTTTAGGTCTTGTAATACTGACCTTTATGGTTTTATTTGCCTTCATAGGACCTT
ATTTTTCGCCGCATCAGGACGTACCCGATGTGACAAAGGCAAATCAGCCCCCAAGTAAAGAGCACTGGCTTGGAACAGAT
AACCTTGGAAGAGATGTCCTTTTAAGGCTTATGCTCGCAGGGAGGATATCTCTCACAATAGGTATAGCCGCTACTTTGAT
ACTCCTATTAATTGGCGTGACTTTGGGGTCTATCTCCGGATATTACGGAGGATGGCTTGATGTCATAATAATGAGAATTG
CAGATATTATATACGCTATGCCCGGACTTCCAATATTGATAGTGATGGGTGCGATAATGTCAGATTTGAAGATACCTCCA
GCTCATAGGATATACTACGTCATGTTCATATTGGGTATTATCTCATGGGTTGGAGTTGCAAGGCTTGTAAGAAGCCAGAT
TTTAAGCTTAAAAGAGCAGGAATTCATGCTGGCAACAGAAGTTTTGGGTTTAAGAGATAGCAAGAAGATAATAAAACACC
TTTTCCCCAACGTACTGCCAACAGTTATTGTCGCCGGAACACTGGGAGTTGCAAGTTCTATAATCTCAGAATCTGCTTTG
AGCTTTTTAGGCTTAGGAGTCGTACCTCCAACACCTTCTTGGGGTTATATGCTTTCTGCCGCCAATAATATGATAGACTT
TGCAAAGCGCCCGTGGCTATGGATTCCGCCAGGCGTTGCCATAATGCTTACTGTCCTTGCTATTAACTTCGTAGGCGACG
CTTTGAGGGACGCTTTTGACCCAAGACAAAAGATTTAG

Upstream 100 bases:

>100_bases
ATGTTAATAACCGTACTTACAATCCTGGCAAATATCCTGGCAGACGTATTATACGGAATAGCCGATCCTAGGGTAAGGCT
TAAATAAGGAGGGATAAAGT

Downstream 100 bases:

>100_bases
GAGGAGTTGAAATGGCAAGAAATATTGTAGAATTTCGCAATCTTAAAACCTACTTCTACACCGAAGAAGGTGTTGTAAAA
GCAGTAAATGACGTCAGCTT

Product: ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Products: NA

Alternate protein names: Stage 0 sporulation protein KC [H]

Number of amino acids: Translated: 305; Mature: 305

Protein sequence:

>305_residues
MERLTPTLDYRKNRKKGGTSLWQDAFRRFIRNKYAILGLVILTFMVLFAFIGPYFSPHQDVPDVTKANQPPSKEHWLGTD
NLGRDVLLRLMLAGRISLTIGIAATLILLLIGVTLGSISGYYGGWLDVIIMRIADIIYAMPGLPILIVMGAIMSDLKIPP
AHRIYYVMFILGIISWVGVARLVRSQILSLKEQEFMLATEVLGLRDSKKIIKHLFPNVLPTVIVAGTLGVASSIISESAL
SFLGLGVVPPTPSWGYMLSAANNMIDFAKRPWLWIPPGVAIMLTVLAINFVGDALRDAFDPRQKI

Sequences:

>Translated_305_residues
MERLTPTLDYRKNRKKGGTSLWQDAFRRFIRNKYAILGLVILTFMVLFAFIGPYFSPHQDVPDVTKANQPPSKEHWLGTD
NLGRDVLLRLMLAGRISLTIGIAATLILLLIGVTLGSISGYYGGWLDVIIMRIADIIYAMPGLPILIVMGAIMSDLKIPP
AHRIYYVMFILGIISWVGVARLVRSQILSLKEQEFMLATEVLGLRDSKKIIKHLFPNVLPTVIVAGTLGVASSIISESAL
SFLGLGVVPPTPSWGYMLSAANNMIDFAKRPWLWIPPGVAIMLTVLAINFVGDALRDAFDPRQKI
>Mature_305_residues
MERLTPTLDYRKNRKKGGTSLWQDAFRRFIRNKYAILGLVILTFMVLFAFIGPYFSPHQDVPDVTKANQPPSKEHWLGTD
NLGRDVLLRLMLAGRISLTIGIAATLILLLIGVTLGSISGYYGGWLDVIIMRIADIIYAMPGLPILIVMGAIMSDLKIPP
AHRIYYVMFILGIISWVGVARLVRSQILSLKEQEFMLATEVLGLRDSKKIIKHLFPNVLPTVIVAGTLGVASSIISESAL
SFLGLGVVPPTPSWGYMLSAANNMIDFAKRPWLWIPPGVAIMLTVLAINFVGDALRDAFDPRQKI

Specific function: Part of the binding-protein-dependent transport system for oligopeptides; probably responsible for the translocation of the substrate across the membrane. Also required for sporulation and competence [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=285, Percent_Identity=37.5438596491228, Blast_Score=197, Evalue=6e-52,
Organism=Escherichia coli, GI1787498, Length=299, Percent_Identity=38.7959866220736, Blast_Score=185, Evalue=3e-48,
Organism=Escherichia coli, GI1789964, Length=294, Percent_Identity=39.7959183673469, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1787760, Length=302, Percent_Identity=29.4701986754967, Blast_Score=145, Evalue=4e-36,
Organism=Escherichia coli, GI1789889, Length=232, Percent_Identity=36.2068965517241, Blast_Score=143, Evalue=2e-35,
Organism=Escherichia coli, GI1788505, Length=239, Percent_Identity=32.2175732217573, Blast_Score=131, Evalue=5e-32,
Organism=Escherichia coli, GI1787549, Length=296, Percent_Identity=28.0405405405405, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 33773; Mature: 33773

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCC
>Mature Secondary Structure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CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1901616; 1899858; 9384377 [H]