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The map label for this gene is 20808834

Identifier: 20808834

GI number: 20808834

Start: 2366098

End: 2367312

Strand: Direct

Name: 20808834

Synonym: TTE2479

Alternate gene names: NA

Gene position: 2366098-2367312 (Clockwise)

Preceding gene: 20808832

Following gene: 20808843

Centisome position: 87.98

GC content: 33.33

Gene sequence:

>1215_bases
ATGAGTGAAGTTATTAATAATAGAGAATACAGGAGAAAACTTTTAAAAGAAGTTATAAAAGAACTTCATAGAGGTAAAAG
TGTTGCGGAAGTTAAAGAAAAATTTAAAGATGTCATAGACGGAATAACTTCTACAGAATTGTCAGCAATAGAACAAGAAC
TAATAAATGAGGGACTGGACGTAAAAGAAGTACAAAGGCTATGTGATGTCCATGCTGAAGTGTTTAGAGAGTCATTAGAA
CAGCTAAAAAAGCCCGAAACAATTCCGGGGCACCCAGTACACACCTTTAAAGAAGAAAACAGAGCAATAGAAAAACACAT
TAATGAAAATATAAAACCTGCTCTTGAAAAATTAAAAAGCAGCGGAAGTTTTGAAGACGCTCAAAAGCTATTAGAGCATA
TTAATCTTTTGATGGATATAGACAAGCATTATTCGAGAAAAGAAAACTTGCTCTTTCCGTACCTTGAAAAATACGGCATA
ACGGGACCTCCCTCTGTCATGTGGGGTGTTGATGATGAAATAAGGAAAATGCTCAAAGACTTGAGAACAACCCTTATTAA
TTATGATAATTCAAAAAAAGAAGAAATATTACAGCATGCCAATGCTACATTAAACAAAATATTAGACATGATTTTTAAAG
AAGAAAATATACTTTTACCCATGGCATTAGACACCCTTACAGAAGATGAATGGATAAGTATAATGGAAGAAAGTGATGAA
ATAGGATATTGCCTTATTGAACCAGAGATAAAGTGGCACCCAGAACGTGTCAATGTTGAGAAAAAAGAAAAATTTAGTGA
TGAAGCATCCCAGAGTTATATAAAATTTGATACAGGCATTTTAAAGCCAGAAGAAATAAGTGCCATATTTGATAATCTCC
CTTTTGACATAACATTTGTAGACAAAGATGACATAGTAAAATATTTTTCCAACACAAAAGACAGAATATTTGCAAGGACA
AAATCCGTCATTGGTAGAAAAGTTCAATATTGTCATCCACCTGCAAGTGTCCATATTGTTGAACAGCTGCTTCAGGACTT
TAAATCAGGCAAAAAAAGTCATGAAGACTTCTGGATAAAGTTGGGCGACAAATATGTATTTATAAGATATTTTGCTATAA
GAGATAAAAACGGTGAATACATAGGTACTTTAGAGGTGACACAGGATATCGCTCCTATAAAAGCAATAGAAGGAGAAAAG
AGGCTTATGTCTTAA

Upstream 100 bases:

>100_bases
ATTCATAAAAATTATTTAAATTTGTGAGATATATCACAGTAAAATTTTTAATACAGGGTAAAATATAATCAGGTATGTTA
ACAAAGAGGAGGTACTTTCC

Downstream 100 bases:

>100_bases
TAAATTTTAAAGGGGACAGCTTTAAAAACTGTCCCCTTTATTTTCTCTATCTACTCAAAAATTACTTTGCACTCTTTAAA
GCCTCTGCAGCTAATTCTTT

Product: hypothetical protein

Products: NA

Alternate protein names: Sensory Box Protein; NADPH-Dependent FMN Reductase; Pas/Pac Sensor Protein; PAS Domain S-Box; PAS Domain S-Box Protein

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MSEVINNREYRRKLLKEVIKELHRGKSVAEVKEKFKDVIDGITSTELSAIEQELINEGLDVKEVQRLCDVHAEVFRESLE
QLKKPETIPGHPVHTFKEENRAIEKHINENIKPALEKLKSSGSFEDAQKLLEHINLLMDIDKHYSRKENLLFPYLEKYGI
TGPPSVMWGVDDEIRKMLKDLRTTLINYDNSKKEEILQHANATLNKILDMIFKEENILLPMALDTLTEDEWISIMEESDE
IGYCLIEPEIKWHPERVNVEKKEKFSDEASQSYIKFDTGILKPEEISAIFDNLPFDITFVDKDDIVKYFSNTKDRIFART
KSVIGRKVQYCHPPASVHIVEQLLQDFKSGKKSHEDFWIKLGDKYVFIRYFAIRDKNGEYIGTLEVTQDIAPIKAIEGEK
RLMS

Sequences:

>Translated_404_residues
MSEVINNREYRRKLLKEVIKELHRGKSVAEVKEKFKDVIDGITSTELSAIEQELINEGLDVKEVQRLCDVHAEVFRESLE
QLKKPETIPGHPVHTFKEENRAIEKHINENIKPALEKLKSSGSFEDAQKLLEHINLLMDIDKHYSRKENLLFPYLEKYGI
TGPPSVMWGVDDEIRKMLKDLRTTLINYDNSKKEEILQHANATLNKILDMIFKEENILLPMALDTLTEDEWISIMEESDE
IGYCLIEPEIKWHPERVNVEKKEKFSDEASQSYIKFDTGILKPEEISAIFDNLPFDITFVDKDDIVKYFSNTKDRIFART
KSVIGRKVQYCHPPASVHIVEQLLQDFKSGKKSHEDFWIKLGDKYVFIRYFAIRDKNGEYIGTLEVTQDIAPIKAIEGEK
RLMS
>Mature_403_residues
SEVINNREYRRKLLKEVIKELHRGKSVAEVKEKFKDVIDGITSTELSAIEQELINEGLDVKEVQRLCDVHAEVFRESLEQ
LKKPETIPGHPVHTFKEENRAIEKHINENIKPALEKLKSSGSFEDAQKLLEHINLLMDIDKHYSRKENLLFPYLEKYGIT
GPPSVMWGVDDEIRKMLKDLRTTLINYDNSKKEEILQHANATLNKILDMIFKEENILLPMALDTLTEDEWISIMEESDEI
GYCLIEPEIKWHPERVNVEKKEKFSDEASQSYIKFDTGILKPEEISAIFDNLPFDITFVDKDDIVKYFSNTKDRIFARTK
SVIGRKVQYCHPPASVHIVEQLLQDFKSGKKSHEDFWIKLGDKYVFIRYFAIRDKNGEYIGTLEVTQDIAPIKAIEGEKR
LMS

Specific function: Unknown

COG id: COG2461

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47072; Mature: 46941

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEVINNREYRRKLLKEVIKELHRGKSVAEVKEKFKDVIDGITSTELSAIEQELINEGLD
CCCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
VKEVQRLCDVHAEVFRESLEQLKKPETIPGHPVHTFKEENRAIEKHINENIKPALEKLKS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
SGSFEDAQKLLEHINLLMDIDKHYSRKENLLFPYLEKYGITGPPSVMWGVDDEIRKMLKD
CCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHH
LRTTLINYDNSKKEEILQHANATLNKILDMIFKEENILLPMALDTLTEDEWISIMEESDE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHCCCC
IGYCLIEPEIKWHPERVNVEKKEKFSDEASQSYIKFDTGILKPEEISAIFDNLPFDITFV
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEE
DKDDIVKYFSNTKDRIFARTKSVIGRKVQYCHPPASVHIVEQLLQDFKSGKKSHEDFWIK
CHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
LGDKYVFIRYFAIRDKNGEYIGTLEVTQDIAPIKAIEGEKRLMS
ECCEEEEEEEEEEECCCCCEEEEEEHHHCCHHHHHCCCHHHHCC
>Mature Secondary Structure 
SEVINNREYRRKLLKEVIKELHRGKSVAEVKEKFKDVIDGITSTELSAIEQELINEGLD
CCHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC
VKEVQRLCDVHAEVFRESLEQLKKPETIPGHPVHTFKEENRAIEKHINENIKPALEKLKS
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHC
SGSFEDAQKLLEHINLLMDIDKHYSRKENLLFPYLEKYGITGPPSVMWGVDDEIRKMLKD
CCCHHHHHHHHHHHHHHHHHHHHHCHHCCCCHHHHHHCCCCCCCCEEECCCHHHHHHHHH
LRTTLINYDNSKKEEILQHANATLNKILDMIFKEENILLPMALDTLTEDEWISIMEESDE
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHCCHHHHHHHHCCCC
IGYCLIEPEIKWHPERVNVEKKEKFSDEASQSYIKFDTGILKPEEISAIFDNLPFDITFV
CCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCEEEEE
DKDDIVKYFSNTKDRIFARTKSVIGRKVQYCHPPASVHIVEQLLQDFKSGKKSHEDFWIK
CHHHHHHHHHCCHHHHHHHHHHHHHCHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
LGDKYVFIRYFAIRDKNGEYIGTLEVTQDIAPIKAIEGEKRLMS
ECCEEEEEEEEEEECCCCCEEEEEEHHHCCHHHHHCCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA