| Definition | Thermoanaerobacter tengcongensis MB4, complete genome. |
|---|---|
| Accession | NC_003869 |
| Length | 2,689,445 |
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The map label for this gene is yabP [H]
Identifier: 20808807
GI number: 20808807
Start: 2339071
End: 2339367
Strand: Reverse
Name: yabP [H]
Synonym: TTE2450
Alternate gene names: 20808807
Gene position: 2339367-2339071 (Counterclockwise)
Preceding gene: 20808808
Following gene: 20808806
Centisome position: 86.98
GC content: 38.72
Gene sequence:
>297_bases ATGGAGGATAAAAGGTTTGTGCAGAAAGGGACAAAGCCCCATAATGTGTCTATAGAAAATAGAGAGAAGATGAGTATCAC GGGGGTTGTGAATGTGATAAGTTTTGATGAAGAATCTGTGATTGTGGAGACAGAGATGGGGATTTTGACTGTAAGGGGGC AGGGTCTTCACATCAACAAGCTCAATCTGGATGAGGGACAAGTATCATTAGATGGAGAAATTATAAATCTAAATTACTCT GAAAAAGGAGGACTTGTTTCAAAGTCTGGAGGATTTATAAGCAGGATGTTTAGATAA
Upstream 100 bases:
>100_bases GATAAATATAGTTAAAATATGGGATTAGGGAATTTTTGTTCTAAAAAATGTACAAGAGTCATAGATAATAGTAGCTGCAA AAATAAAGGGGGAATCTTTT
Downstream 100 bases:
>100_bases GTCGCGCAATGCGGCTTTTTTATTTTGCCTTTTCTTGCTATAATAAAAGTGCAAAACTGTTCAGTAAGCTATGAGGTGAG AATATGGCAGAGGAGAAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 98; Mature: 98
Protein sequence:
>98_residues MEDKRFVQKGTKPHNVSIENREKMSITGVVNVISFDEESVIVETEMGILTVRGQGLHINKLNLDEGQVSLDGEIINLNYS EKGGLVSKSGGFISRMFR
Sequences:
>Translated_98_residues MEDKRFVQKGTKPHNVSIENREKMSITGVVNVISFDEESVIVETEMGILTVRGQGLHINKLNLDEGQVSLDGEIINLNYS EKGGLVSKSGGFISRMFR >Mature_98_residues MEDKRFVQKGTKPHNVSIENREKMSITGVVNVISFDEESVIVETEMGILTVRGQGLHINKLNLDEGQVSLDGEIINLNYS EKGGLVSKSGGFISRMFR
Specific function: Required for sporulation [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Forespore outer membrane. Note=Forms a ring around the forespore [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012504 - InterPro: IPR022476 - ProDom: PD067726 [H]
Pfam domain/function: PF07873 YabP [H]
EC number: NA
Molecular weight: Translated: 10897; Mature: 10897
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEDKRFVQKGTKPHNVSIENREKMSITGVVNVISFDEESVIVETEMGILTVRGQGLHINK CCCCCHHHCCCCCCCCEECCCCEEEEEEEEEEEEECCCCEEEEECCCEEEECCCCEEEEE LNLDEGQVSLDGEIINLNYSEKGGLVSKSGGFISRMFR ECCCCCEEEECCEEEEEEECCCCCEEECCCCCEEECCC >Mature Secondary Structure MEDKRFVQKGTKPHNVSIENREKMSITGVVNVISFDEESVIVETEMGILTVRGQGLHINK CCCCCHHHCCCCCCCCEECCCCEEEEEEEEEEEEECCCCEEEEECCCEEEECCCCEEEEE LNLDEGQVSLDGEIINLNYSEKGGLVSKSGGFISRMFR ECCCCCEEEECCEEEEEEECCCCCEEECCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]