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The map label for this gene is Lrp [H]

Identifier: 20808799

GI number: 20808799

Start: 2332832

End: 2333167

Strand: Reverse

Name: Lrp [H]

Synonym: TTE2441

Alternate gene names: 20808799

Gene position: 2333167-2332832 (Counterclockwise)

Preceding gene: 20808800

Following gene: 20808798

Centisome position: 86.75

GC content: 37.2

Gene sequence:

>336_bases
TTGATAGATTGGGAAAAAATAAATCGCGAAGTAGTGACTGCTCTCATAGATGTAAAAGCAACTCCGCAGCAGGAACTGGG
GTTTAATGCTATAGCTCATAAAATATGCCAGTTTGAAGAAGTAAAATCCGTGTCATTAATCTCAGGTACATACGACCTTT
CTGTAGAAGTAGAAGGGAAAACAATGAAGGAAATAGCATTATTTGTAGCTGAAAAATTGGTTCCGATCGATGGCGTCCTG
AGTATCACAACTCATTTTATACTTAAAAGGTATAAAGAGGACGGCGTATTATATGAAGAGAATCAAGATGATAAAAGACT
GGTGATAGCACCATGA

Upstream 100 bases:

>100_bases
AGAACATCAAATTGCTTCAATTCTAGGGATTAGCGAAGAAGAAGTAAAAAGCACAATAAAAGAATTAGAAAACAAAAAAG
TAATTTTAAAATACTCTGCC

Downstream 100 bases:

>100_bases
ATCCTAATAAATACATATCTGATGTAGTAAAGAAAATACCACCTTCTGGGATTAGGAAATTTTTTGACCTTGTTACCAAC
TCAAAGGATATAATATCACT

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MIDWEKINREVVTALIDVKATPQQELGFNAIAHKICQFEEVKSVSLISGTYDLSVEVEGKTMKEIALFVAEKLVPIDGVL
SITTHFILKRYKEDGVLYEENQDDKRLVIAP

Sequences:

>Translated_111_residues
MIDWEKINREVVTALIDVKATPQQELGFNAIAHKICQFEEVKSVSLISGTYDLSVEVEGKTMKEIALFVAEKLVPIDGVL
SITTHFILKRYKEDGVLYEENQDDKRLVIAP
>Mature_111_residues
MIDWEKINREVVTALIDVKATPQQELGFNAIAHKICQFEEVKSVSLISGTYDLSVEVEGKTMKEIALFVAEKLVPIDGVL
SITTHFILKRYKEDGVLYEENQDDKRLVIAP

Specific function: Unknown

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 12565; Mature: 12565

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIDWEKINREVVTALIDVKATPQQELGFNAIAHKICQFEEVKSVSLISGTYDLSVEVEGK
CCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCC
TMKEIALFVAEKLVPIDGVLSITTHFILKRYKEDGVLYEENQDDKRLVIAP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECC
>Mature Secondary Structure
MIDWEKINREVVTALIDVKATPQQELGFNAIAHKICQFEEVKSVSLISGTYDLSVEVEGK
CCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHCCEEEEECCEEEEEEECCC
TMKEIALFVAEKLVPIDGVLSITTHFILKRYKEDGVLYEENQDDKRLVIAP
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]