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The map label for this gene is ctsR [H]

Identifier: 20808696

GI number: 20808696

Start: 2212658

End: 2213122

Strand: Reverse

Name: ctsR [H]

Synonym: TTE2330

Alternate gene names: 20808696

Gene position: 2213122-2212658 (Counterclockwise)

Preceding gene: 20808697

Following gene: 20808695

Centisome position: 82.29

GC content: 39.14

Gene sequence:

>465_bases
ATGGGGATGGCGAGGCTTAGTGACTTGATTGAAAATTTCATTAAAGAGTTGATGGAGGAAGCAGGGAAGCATTATGTGGA
AATTCAGAGGAATGAATTGGCAAATGTGTTCAATTGTGCGCCATCTCAAATAAATTATGTACTGGAAACGCGCTTTACTA
TAGACAAAGGCTACATCATAGAGAGCAAAAGAGGTGGCGGCGGATACATCAAAATCTACAAAGCTTCTGTTTCAAATAAC
TGGATAAATCAGGTTATAGAAAATGTAGGAGATAGCATTTCTGAGAGCAAAGCCAAGTATTATATTGATGCACTGCTGGA
CCACAATTTCATAACGGCCAGAGAGGCTAGTTTAATGAAAGCTGTAATGAATGATAAAATTCTTCCTTTTTCGCAGGAAG
AGAAGAACGCCTTAAGGGCAATACTTTTAAAGGCCTTTTTAATGGAAGTTGCCCGCCACAAGTAG

Upstream 100 bases:

>100_bases
TGTTTTAAGCCAAAAAAGAAATTGACGGGGGAGAGGAAAAGTGAAAAAATATAAGTGAAAGTCAAAGAAAGTCAAAGTAA
AATACGCAGGAAATGTGGTG

Downstream 100 bases:

>100_bases
AGGAGGGATTCTTATGATGTGCGATAAATGCAAGATAAGGCCTGCTACTGTTCACTATACTAAGATAGTAAATGGCGTAA
AGACAGAAATGCATCTTTGT

Product: transcription repressor of class III stress genes

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 153

Protein sequence:

>154_residues
MGMARLSDLIENFIKELMEEAGKHYVEIQRNELANVFNCAPSQINYVLETRFTIDKGYIIESKRGGGGYIKIYKASVSNN
WINQVIENVGDSISESKAKYYIDALLDHNFITAREASLMKAVMNDKILPFSQEEKNALRAILLKAFLMEVARHK

Sequences:

>Translated_154_residues
MGMARLSDLIENFIKELMEEAGKHYVEIQRNELANVFNCAPSQINYVLETRFTIDKGYIIESKRGGGGYIKIYKASVSNN
WINQVIENVGDSISESKAKYYIDALLDHNFITAREASLMKAVMNDKILPFSQEEKNALRAILLKAFLMEVARHK
>Mature_153_residues
GMARLSDLIENFIKELMEEAGKHYVEIQRNELANVFNCAPSQINYVLETRFTIDKGYIIESKRGGGGYIKIYKASVSNNW
INQVIENVGDSISESKAKYYIDALLDHNFITAREASLMKAVMNDKILPFSQEEKNALRAILLKAFLMEVARHK

Specific function: Negative regulator of clpC, clpB and clpP transcription by binding directly and specifically to their promoter region [H]

COG id: COG4463

COG function: function code K; Transcriptional repressor of class III stress genes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CtsR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008463 [H]

Pfam domain/function: PF05848 CtsR [H]

EC number: NA

Molecular weight: Translated: 17566; Mature: 17434

Theoretical pI: Translated: 7.59; Mature: 7.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGMARLSDLIENFIKELMEEAGKHYVEIQRNELANVFNCAPSQINYVLETRFTIDKGYII
CCHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHCCHHHHHHHHHHEEEECCCEEE
ESKRGGGGYIKIYKASVSNNWINQVIENVGDSISESKAKYYIDALLDHNFITAREASLMK
ECCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AVMNDKILPFSQEEKNALRAILLKAFLMEVARHK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
GMARLSDLIENFIKELMEEAGKHYVEIQRNELANVFNCAPSQINYVLETRFTIDKGYII
CHHHHHHHHHHHHHHHHHHHCHHHEEHHHHHHHHHHHCCHHHHHHHHHHEEEECCCEEE
ESKRGGGGYIKIYKASVSNNWINQVIENVGDSISESKAKYYIDALLDHNFITAREASLMK
ECCCCCCCEEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
AVMNDKILPFSQEEKNALRAILLKAFLMEVARHK
HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA