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The map label for this gene is RPL8A.2

Identifier: 20808666

GI number: 20808666

Start: 2180522

End: 2180770

Strand: Reverse

Name: RPL8A.2

Synonym: TTE2299

Alternate gene names: NA

Gene position: 2180770-2180522 (Counterclockwise)

Preceding gene: 20808667

Following gene: 20808665

Centisome position: 81.09

GC content: 42.97

Gene sequence:

>249_bases
ATGGCGGAACAATGCCCTCCCAAAAGGGTGGTTGGGGCTAAACAGACTTTAAAAGCAGTGTTAAACTGCAAAGTAGCTCA
GGTGTACATTGCAAAGGATGCAGAAGAGCATGTGGTCAAAAAGATAAAAGAAGCGTGCGAAGAAAAGGGTATAAAAATAG
TTTACATTGATACTATGAAAGAGCTTGGCAGGATGTGCGGTATTGATGTAGGTGCTGCCACTGCGGCAGATGTAATAGGG
GAAAGATAA

Upstream 100 bases:

>100_bases
AAGCTGCCCCTGTCAGAATAATTCATTGTTGACAGGGAAAATCTTTAATGATAAAATTACTAAGTGTGTCAAAACCCCTG
TCCTGATAGGAGGAAGGCAA

Downstream 100 bases:

>100_bases
AAGGAGGTGCAATAATGCCAACAGTAAACCAGCTTGTGAGATTTGGAAGGCAAAGTGTTAAAAAGAAATCTGCTGCTCCA
GCTTTGCAGGGCAATCCTCA

Product: putative L7Ae-like ribosomal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MAEQCPPKRVVGAKQTLKAVLNCKVAQVYIAKDAEEHVVKKIKEACEEKGIKIVYIDTMKELGRMCGIDVGAATAADVIG
ER

Sequences:

>Translated_82_residues
MAEQCPPKRVVGAKQTLKAVLNCKVAQVYIAKDAEEHVVKKIKEACEEKGIKIVYIDTMKELGRMCGIDVGAATAADVIG
ER
>Mature_81_residues
AEQCPPKRVVGAKQTLKAVLNCKVAQVYIAKDAEEHVVKKIKEACEEKGIKIVYIDTMKELGRMCGIDVGAATAADVIGE
R

Specific function: Unknown

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RXL7_THETN (Q8R7U8)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623837.1
- ProteinModelPortal:   Q8R7U8
- SMR:   Q8R7U8
- GeneID:   996258
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE2299
- NMPDR:   fig|273068.3.peg.2478
- HOGENOM:   HBG739027
- OMA:   VYVDTMK
- ProtClustDB:   PRK13601
- BioCyc:   TTEN273068:TTE2299-MONOMER
- GO:   GO:0005840
- HAMAP:   MF_00574
- InterPro:   IPR004038

Pfam domain/function: PF01248 Ribosomal_L7Ae

EC number: NA

Molecular weight: Translated: 8903; Mature: 8771

Theoretical pI: Translated: 8.32; Mature: 8.32

Prosite motif: PS01082 RIBOSOMAL_L7AE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
4.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEQCPPKRVVGAKQTLKAVLNCKVAQVYIAKDAEEHVVKKIKEACEEKGIKIVYIDTMK
CCCCCCCHHHCCHHHHHHHHHCCHHHHHEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHH
ELGRMCGIDVGAATAADVIGER
HHHHHHCCCCCHHHHHHHHCCC
>Mature Secondary Structure 
AEQCPPKRVVGAKQTLKAVLNCKVAQVYIAKDAEEHVVKKIKEACEEKGIKIVYIDTMK
CCCCCCHHHCCHHHHHHHHHCCHHHHHEECCCCHHHHHHHHHHHHHHCCCEEEEHHHHH
ELGRMCGIDVGAATAADVIGER
HHHHHHCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11997336