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The map label for this gene is TufB

Identifier: 20808662

GI number: 20808662

Start: 2176297

End: 2177499

Strand: Reverse

Name: TufB

Synonym: TTE2295

Alternate gene names: 20808662

Gene position: 2177499-2176297 (Counterclockwise)

Preceding gene: 20808663

Following gene: 20808661

Centisome position: 80.96

GC content: 48.88

Gene sequence:

>1203_bases
ATGGCAAAGCAGAAATTTGAGAGGACGAAGCCGCACGTAAACGTAGGGACGATAGGGCACGTAGACCATGGTAAGACGAC
ATTGACAGCAGCGATAACATTAATACTTTCGAAAGCGGGATTAGCACAGGCGAAGGGATATGACGAGATAGACAAGGCGC
CAGAGGAGAAGGCAAGGGGTATAACAATAAACACGACGCACGTAGAGTATGAGACAGCGAAGAGGCACTATGCGCACGTA
GACTGTCCGGGTCACGCGGACTATGTAAAGAACATGATAACAGGGGCAGCGCAGATGGACGGAGCGATACTGGTAGTATC
AGCAGCAGACGGTCCGATGCCGCAGACGAGGGAGCACATATTATTGGCAAGGCAGGTAGGAGTGCCATATATAGTAGTAT
TTTTGAACAAAGCGGACATGGTAGACGATCCGGAGTTAATAGAGCTAGTAGAGATGGAGGTAAGGGACTTACTGAACCAG
TACGAATTTCCTGGGGATGACACACCGATAGTAGTAGGTTCAGCGTTAAAGGCATTAGAGTGTGGATGCGGCAAGAGGGA
GTGCCAGTGGTGCGGCAAGATATGGGAGTTAATGGATGTAGTAGACGAATATATACCGACACCGGAGAGGGATATAGACA
AGCCGTTCTTGATGCCGGTAGAGGACGTATTTACGATAACGGGAAGAGGTACAGTTGCGACAGGTAGAGTAGAGAGAGGG
AAAGTGAAAGTAGGGGACGAAGTAGAGATAATAGGATTGACGACGGAGTCAAGGAAGACAGTAGTGACAGGAGTAGAGAT
GTTCAGGAAGACATTAGATGAGGCACAGGCAGGAGACAACATAGGGGTATTGTTAAGAGGGATACAGAGGGATGAAGTAG
AGAGAGGGCAGGTACTGGCGAAACCAGGGACGATAAAGCCGCACACGAAATTTGAGGCACAGGTGTACGTATTGACGAAG
GAAGAGGGAGGAAGGCACACACCATTTTTCAATGGATACAGGCCGCAGTTTTACTTTAGGACGACAGACGTGACGGGTAC
GATACAGCTACCAGAGGGAGTAGAGATGGTAATGCCAGGAGACCACGTGACATTGAGAGTAGAGCTTATAACGCCGATAG
CGATGGAAGAAGGGCTTAAGTTTGCTATAAGAGAAGGCGGAAGGACAGTTGGCGCTGGTGTCGTATCTGCTATAATTGAG
TAG

Upstream 100 bases:

>100_bases
CTTACACGATGCAGTTCCATCACTATGAAGAAGTGCCTAAAAATATTGCTGAGCAAATATTATCAGCAAAAAAATAAACT
AAAAGGAGGAGGAAGAGAGG

Downstream 100 bases:

>100_bases
TCATATTTTTGTGCTAATAGCGTTTCGCTATTAGCACAAAAATATTGACATGTCAAGTCTTGCAATAGCGCAAGAATTGG
GATAAAATAATAAAGCTGGT

Product: elongation factor Tu

Products: GDP; phosphate

Alternate protein names: EF-Tu-A

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MAKQKFERTKPHVNVGTIGHVDHGKTTLTAAITLILSKAGLAQAKGYDEIDKAPEEKARGITINTTHVEYETAKRHYAHV
DCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKADMVDDPELIELVEMEVRDLLNQ
YEFPGDDTPIVVGSALKALECGCGKRECQWCGKIWELMDVVDEYIPTPERDIDKPFLMPVEDVFTITGRGTVATGRVERG
KVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLAKPGTIKPHTKFEAQVYVLTK
EEGGRHTPFFNGYRPQFYFRTTDVTGTIQLPEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE

Sequences:

>Translated_400_residues
MAKQKFERTKPHVNVGTIGHVDHGKTTLTAAITLILSKAGLAQAKGYDEIDKAPEEKARGITINTTHVEYETAKRHYAHV
DCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKADMVDDPELIELVEMEVRDLLNQ
YEFPGDDTPIVVGSALKALECGCGKRECQWCGKIWELMDVVDEYIPTPERDIDKPFLMPVEDVFTITGRGTVATGRVERG
KVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLAKPGTIKPHTKFEAQVYVLTK
EEGGRHTPFFNGYRPQFYFRTTDVTGTIQLPEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE
>Mature_399_residues
AKQKFERTKPHVNVGTIGHVDHGKTTLTAAITLILSKAGLAQAKGYDEIDKAPEEKARGITINTTHVEYETAKRHYAHVD
CPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHILLARQVGVPYIVVFLNKADMVDDPELIELVEMEVRDLLNQY
EFPGDDTPIVVGSALKALECGCGKRECQWCGKIWELMDVVDEYIPTPERDIDKPFLMPVEDVFTITGRGTVATGRVERGK
VKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLAKPGTIKPHTKFEAQVYVLTKE
EGGRHTPFFNGYRPQFYFRTTDVTGTIQLPEGVEMVMPGDHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE

Specific function: This protein promotes the GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis

COG id: COG0050

COG function: function code J; GTPases - translation elongation factors

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding elongation factor family. EF-Tu/EF-1A subfamily

Homologues:

Organism=Homo sapiens, GI34147630, Length=395, Percent_Identity=58.2278481012658, Blast_Score=481, Evalue=1e-136,
Organism=Homo sapiens, GI223555963, Length=443, Percent_Identity=29.3453724604966, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI5729864, Length=437, Percent_Identity=29.5194508009153, Blast_Score=161, Evalue=9e-40,
Organism=Homo sapiens, GI4503471, Length=446, Percent_Identity=29.5964125560538, Blast_Score=157, Evalue=2e-38,
Organism=Homo sapiens, GI4503475, Length=447, Percent_Identity=28.4116331096197, Blast_Score=149, Evalue=4e-36,
Organism=Homo sapiens, GI54607086, Length=349, Percent_Identity=29.2263610315186, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI194018522, Length=348, Percent_Identity=28.1609195402299, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI194018520, Length=348, Percent_Identity=28.1609195402299, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI194097354, Length=348, Percent_Identity=28.1609195402299, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI46094014, Length=348, Percent_Identity=27.8735632183908, Blast_Score=123, Evalue=3e-28,
Organism=Homo sapiens, GI4503507, Length=360, Percent_Identity=26.9444444444444, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI157426893, Length=241, Percent_Identity=26.5560165975104, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI1790412, Length=399, Percent_Identity=76.1904761904762, Blast_Score=606, Evalue=1e-175,
Organism=Escherichia coli, GI1789737, Length=399, Percent_Identity=76.1904761904762, Blast_Score=606, Evalue=1e-175,
Organism=Escherichia coli, GI2367247, Length=343, Percent_Identity=30.0291545189504, Blast_Score=134, Evalue=1e-32,
Organism=Escherichia coli, GI48994988, Length=280, Percent_Identity=32.1428571428571, Blast_Score=106, Evalue=3e-24,
Organism=Escherichia coli, GI1789108, Length=262, Percent_Identity=31.2977099236641, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1790835, Length=176, Percent_Identity=29.5454545454545, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17556456, Length=402, Percent_Identity=52.2388059701493, Blast_Score=401, Evalue=1e-112,
Organism=Caenorhabditis elegans, GI25141371, Length=389, Percent_Identity=44.4730077120823, Blast_Score=335, Evalue=2e-92,
Organism=Caenorhabditis elegans, GI17552884, Length=453, Percent_Identity=30.242825607064, Blast_Score=161, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI17569207, Length=453, Percent_Identity=30.242825607064, Blast_Score=161, Evalue=5e-40,
Organism=Caenorhabditis elegans, GI32566303, Length=430, Percent_Identity=29.5348837209302, Blast_Score=140, Evalue=2e-33,
Organism=Caenorhabditis elegans, GI115532067, Length=442, Percent_Identity=27.1493212669683, Blast_Score=130, Evalue=1e-30,
Organism=Caenorhabditis elegans, GI115532065, Length=439, Percent_Identity=27.1070615034169, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI32566629, Length=457, Percent_Identity=27.1334792122538, Blast_Score=129, Evalue=2e-30,
Organism=Caenorhabditis elegans, GI17506081, Length=304, Percent_Identity=30.5921052631579, Blast_Score=115, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI32566301, Length=149, Percent_Identity=39.5973154362416, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI17509919, Length=282, Percent_Identity=27.3049645390071, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI17557151, Length=241, Percent_Identity=28.6307053941909, Blast_Score=79, Evalue=6e-15,
Organism=Saccharomyces cerevisiae, GI6324761, Length=399, Percent_Identity=65.9147869674186, Blast_Score=542, Evalue=1e-155,
Organism=Saccharomyces cerevisiae, GI6325337, Length=445, Percent_Identity=29.8876404494382, Blast_Score=155, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6319594, Length=445, Percent_Identity=29.8876404494382, Blast_Score=155, Evalue=9e-39,
Organism=Saccharomyces cerevisiae, GI6320377, Length=346, Percent_Identity=27.7456647398844, Blast_Score=105, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6322937, Length=354, Percent_Identity=24.0112994350282, Blast_Score=89, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320863, Length=295, Percent_Identity=26.7796610169492, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6323320, Length=243, Percent_Identity=29.6296296296296, Blast_Score=75, Evalue=1e-14,
Organism=Saccharomyces cerevisiae, GI6323098, Length=141, Percent_Identity=32.6241134751773, Blast_Score=64, Evalue=4e-11,
Organism=Drosophila melanogaster, GI281363316, Length=399, Percent_Identity=57.3934837092732, Blast_Score=467, Evalue=1e-132,
Organism=Drosophila melanogaster, GI17864358, Length=399, Percent_Identity=57.3934837092732, Blast_Score=467, Evalue=1e-132,
Organism=Drosophila melanogaster, GI19921738, Length=391, Percent_Identity=50.383631713555, Blast_Score=404, Evalue=1e-113,
Organism=Drosophila melanogaster, GI45553807, Length=456, Percent_Identity=30.2631578947368, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI45553816, Length=456, Percent_Identity=30.2631578947368, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24651721, Length=456, Percent_Identity=30.2631578947368, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI17864154, Length=456, Percent_Identity=30.2631578947368, Blast_Score=159, Evalue=4e-39,
Organism=Drosophila melanogaster, GI24652838, Length=454, Percent_Identity=29.5154185022026, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI17137572, Length=454, Percent_Identity=29.5154185022026, Blast_Score=155, Evalue=4e-38,
Organism=Drosophila melanogaster, GI19922690, Length=309, Percent_Identity=32.6860841423948, Blast_Score=140, Evalue=2e-33,
Organism=Drosophila melanogaster, GI45550900, Length=452, Percent_Identity=28.9823008849558, Blast_Score=135, Evalue=5e-32,
Organism=Drosophila melanogaster, GI17137380, Length=341, Percent_Identity=31.6715542521994, Blast_Score=125, Evalue=3e-29,
Organism=Drosophila melanogaster, GI24647048, Length=424, Percent_Identity=26.6509433962264, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24647046, Length=424, Percent_Identity=26.6509433962264, Blast_Score=91, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28572034, Length=166, Percent_Identity=37.9518072289157, Blast_Score=69, Evalue=4e-12,

Paralogues:

None

Copy number: 20568 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): EFTU1_THETN (Q8R7V2)

Other databases:

- EMBL:   AE008691
- RefSeq:   NP_623833.1
- ProteinModelPortal:   Q8R7V2
- SMR:   Q8R7V2
- GeneID:   997712
- GenomeReviews:   AE008691_GR
- KEGG:   tte:TTE2295
- NMPDR:   fig|273068.3.peg.2474
- HOGENOM:   HBG307581
- OMA:   FEGQVYV
- ProtClustDB:   PRK00049
- BioCyc:   TTEN273068:TTE2295-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00118_B
- InterPro:   IPR000795
- InterPro:   IPR005225
- InterPro:   IPR009001
- InterPro:   IPR004161
- InterPro:   IPR004541
- InterPro:   IPR004160
- InterPro:   IPR009000
- PANTHER:   PTHR23115:SF31
- PRINTS:   PR00315
- TIGRFAMs:   TIGR00485
- TIGRFAMs:   TIGR00231

Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF03143 GTP_EFTU_D3; SSF50465 Elong_init_C; SSF50447 Translat_factor

EC number: 3.6.5.3

Molecular weight: Translated: 44037; Mature: 43906

Theoretical pI: Translated: 5.23; Mature: 5.23

Prosite motif: PS00301 EFACTOR_GTP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKQKFERTKPHVNVGTIGHVDHGKTTLTAAITLILSKAGLAQAKGYDEIDKAPEEKARG
CCCCHHHHCCCCEEECEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHCCHHHHHCC
ITINTTHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI
EEEEEEEEEEEHHHCCEEEECCCCHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCHHHH
LLARQVGVPYIVVFLNKADMVDDPELIELVEMEVRDLLNQYEFPGDDTPIVVGSALKALE
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHH
CGCGKRECQWCGKIWELMDVVDEYIPTPERDIDKPFLMPVEDVFTITGRGTVATGRVERG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCEEEECCEECC
KVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLA
EEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCEEE
KPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTIQLPEGVEMVMPG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECC
DHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE
CCEEEEEEEECCHHHHCCCEEEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
AKQKFERTKPHVNVGTIGHVDHGKTTLTAAITLILSKAGLAQAKGYDEIDKAPEEKARG
CCCHHHHCCCCEEECEEECCCCCCHHHHHHHHHHHHHCCHHHCCCCCHHHCCHHHHHCC
ITINTTHVEYETAKRHYAHVDCPGHADYVKNMITGAAQMDGAILVVSAADGPMPQTREHI
EEEEEEEEEEEHHHCCEEEECCCCHHHHHHHHHHCHHHCCCEEEEEECCCCCCCCCHHHH
LLARQVGVPYIVVFLNKADMVDDPELIELVEMEVRDLLNQYEFPGDDTPIVVGSALKALE
HHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHH
CGCGKRECQWCGKIWELMDVVDEYIPTPERDIDKPFLMPVEDVFTITGRGTVATGRVERG
CCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHEEEEECCCEEEECCEECC
KVKVGDEVEIIGLTTESRKTVVTGVEMFRKTLDEAQAGDNIGVLLRGIQRDEVERGQVLA
EEEECCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHCCCCEEE
KPGTIKPHTKFEAQVYVLTKEEGGRHTPFFNGYRPQFYFRTTDVTGTIQLPEGVEMVMPG
CCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEECC
DHVTLRVELITPIAMEEGLKFAIREGGRTVGAGVVSAIIE
CCEEEEEEEECCHHHHCCCEEEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP; H2O

Specific reaction: GTP + H2O = GDP + phosphate

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11997336