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The map label for this gene is CbiQ3 [H]

Identifier: 20808628

GI number: 20808628

Start: 2158598

End: 2159404

Strand: Reverse

Name: CbiQ3 [H]

Synonym: TTE2259

Alternate gene names: 20808628

Gene position: 2159404-2158598 (Counterclockwise)

Preceding gene: 20808629

Following gene: 20808627

Centisome position: 80.29

GC content: 38.79

Gene sequence:

>807_bases
ATGTTTAGGAATATAACTATTGGCCAATATGTTCCCGGTGATTCGGCAATCCACAAATTAGACCCTAGGGTAAAAATCAT
AATTACATTTATATTTATAATAGCCATCTTTTTCATAAACAAATTTTCTGGCTATATTTTTGCGATGCTTTACTTGTGGC
TTGTGATCAGGATTTCCAAAATACCATTTTCTTACGTCCTGAAAGGTTTAAGGCCTGTAATTGTGATACTTTTACTTACA
GTGAGCTTAAACATGTTTTTTACTCCTGGGGGCACTGTGCTTTATACCCTAGGTCCTTTAAAGATTACTAGTGCAGGATT
AAAATTTGCTGTATTTATGGGGCTAAGGCTTATTTTCTTGATAATAGGAACTTCACTGCTTACATTGACAACTTCTCCCA
TTTCTCTTACAGATGGGATAGAACATATTTTAAAGCCTTTTAGTAAAATCGGAGTACCGGCTCATGAACTGGCGATGATG
ATGACTATTGCTTTGCGGTTTATACCTACTCTCATAGAAGAAGCTGAGAAGATAATGAAGGCTCAAATGGCAAGGGGAGC
AGATTTTGAAAGTGGGAACATAGTAAATAGGGCGAGAGGATTAGTGCCTCTTTTGGTTCCGCTTTTTATCAGTGCTTTCA
GGAGAGCCGATGAACTTGCAATAGCTATGGAGTCGAGGTGCTACAGAGGAGGCCACAACAGAACTCGAATGAAAAAACTT
GAAGTGCACACAAGAGACTATGCAGCTCTTTTCATAACAGGTGTAATTGTGGTGCTAATTGTGTGGAACAGAAGTTGGGC
GTGGTAG

Upstream 100 bases:

>100_bases
GCGAGAGAACTTAGAAAGAGGGGAGTGCCAATACCGCCAGATGTTTTGACGATTGAAGAGGCAAAAGAGCATATTCTTCG
CTATCTCAGGGGGACAAAAA

Downstream 100 bases:

>100_bases
TATGAAGAACATAATGCTTATCATTGAATATGACGGGACCAATTATCACGGCTGGCAGTACCAAAAGAATGCCATAACTG
TTCAGGAAGTGCTTGAAAAA

Product: ABC-type cobalt transport system, permease component CbiQ and related transporters

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MFRNITIGQYVPGDSAIHKLDPRVKIIITFIFIIAIFFINKFSGYIFAMLYLWLVIRISKIPFSYVLKGLRPVIVILLLT
VSLNMFFTPGGTVLYTLGPLKITSAGLKFAVFMGLRLIFLIIGTSLLTLTTSPISLTDGIEHILKPFSKIGVPAHELAMM
MTIALRFIPTLIEEAEKIMKAQMARGADFESGNIVNRARGLVPLLVPLFISAFRRADELAIAMESRCYRGGHNRTRMKKL
EVHTRDYAALFITGVIVVLIVWNRSWAW

Sequences:

>Translated_268_residues
MFRNITIGQYVPGDSAIHKLDPRVKIIITFIFIIAIFFINKFSGYIFAMLYLWLVIRISKIPFSYVLKGLRPVIVILLLT
VSLNMFFTPGGTVLYTLGPLKITSAGLKFAVFMGLRLIFLIIGTSLLTLTTSPISLTDGIEHILKPFSKIGVPAHELAMM
MTIALRFIPTLIEEAEKIMKAQMARGADFESGNIVNRARGLVPLLVPLFISAFRRADELAIAMESRCYRGGHNRTRMKKL
EVHTRDYAALFITGVIVVLIVWNRSWAW
>Mature_268_residues
MFRNITIGQYVPGDSAIHKLDPRVKIIITFIFIIAIFFINKFSGYIFAMLYLWLVIRISKIPFSYVLKGLRPVIVILLLT
VSLNMFFTPGGTVLYTLGPLKITSAGLKFAVFMGLRLIFLIIGTSLLTLTTSPISLTDGIEHILKPFSKIGVPAHELAMM
MTIALRFIPTLIEEAEKIMKAQMARGADFESGNIVNRARGLVPLLVPLFISAFRRADELAIAMESRCYRGGHNRTRMKKL
EVHTRDYAALFITGVIVVLIVWNRSWAW

Specific function: Unknown

COG id: COG0619

COG function: function code P; ABC-type cobalt transport system, permease component CbiQ and related transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CbiQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003339 [H]

Pfam domain/function: PF02361 CbiQ [H]

EC number: NA

Molecular weight: Translated: 30194; Mature: 30194

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNITIGQYVPGDSAIHKLDPRVKIIITFIFIIAIFFINKFSGYIFAMLYLWLVIRISK
CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPFSYVLKGLRPVIVILLLTVSLNMFFTPGGTVLYTLGPLKITSAGLKFAVFMGLRLIFL
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHH
IIGTSLLTLTTSPISLTDGIEHILKPFSKIGVPAHELAMMMTIALRFIPTLIEEAEKIMK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMARGADFESGNIVNRARGLVPLLVPLFISAFRRADELAIAMESRCYRGGHNRTRMKKL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EVHTRDYAALFITGVIVVLIVWNRSWAW
HHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFRNITIGQYVPGDSAIHKLDPRVKIIITFIFIIAIFFINKFSGYIFAMLYLWLVIRISK
CCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IPFSYVLKGLRPVIVILLLTVSLNMFFTPGGTVLYTLGPLKITSAGLKFAVFMGLRLIFL
CCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEEEECCCEEHHHHHHHHHHHHHHHHHH
IIGTSLLTLTTSPISLTDGIEHILKPFSKIGVPAHELAMMMTIALRFIPTLIEEAEKIMK
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
AQMARGADFESGNIVNRARGLVPLLVPLFISAFRRADELAIAMESRCYRGGHNRTRMKKL
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
EVHTRDYAALFITGVIVVLIVWNRSWAW
HHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]