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The map label for this gene is yjbQ [C]

Identifier: 20808571

GI number: 20808571

Start: 2099076

End: 2099468

Strand: Reverse

Name: yjbQ [C]

Synonym: TTE2189

Alternate gene names: 20808571

Gene position: 2099468-2099076 (Counterclockwise)

Preceding gene: 20808572

Following gene: 20808570

Centisome position: 78.06

GC content: 34.86

Gene sequence:

>393_bases
ATGCAGAGTGTGTATATAAATACACCATTGAGAGAAGTCATGATAGATATTACAAAAGAGGTGGAAGAAGAAGTTAAAAA
ATCAGGAGTAAAAGAAGGAATTTGTGTAGTTTTTGTGCCCCATACAACAGCTGGCATTACAATAAATGAAAATGCAGACC
CAACAGTAAAAGAAGATATTTTATCTGCTCTTGACAAAATAATACCCAATATTTCTTTTAAGCACCTTGAAGGAAATTCT
GATGCTCATATAAAAGCTTCATTGGTAGGGAGTTCTGTAACTGTGCTTATAGAAAACGGTGAGCTTGTCTTGGGAACTTG
GCAGGGAATTTATTTTTGCGAATTTGATGGGCCGCGAAGAAGAAAAGTGTATATTAAAATTATCCCCTCTTAA

Upstream 100 bases:

>100_bases
TCTTATACTGCTTGTCCCTTTTTAGTTTATAAAGGCAGTTCTTCCTTCAATAATAAAAAATGCAATAAATTTAATTGGTA
GATAAAGGAGGCGTATCTGG

Downstream 100 bases:

>100_bases
CCCCTTCGGAGGGGTTTTTATTTTATGGCAATTTCATATATACGCTGGTACATATAGAAATATATATTCATTGAAATAAA
GGAATATATATGGTACAATG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 130; Mature: 130

Protein sequence:

>130_residues
MQSVYINTPLREVMIDITKEVEEEVKKSGVKEGICVVFVPHTTAGITINENADPTVKEDILSALDKIIPNISFKHLEGNS
DAHIKASLVGSSVTVLIENGELVLGTWQGIYFCEFDGPRRRKVYIKIIPS

Sequences:

>Translated_130_residues
MQSVYINTPLREVMIDITKEVEEEVKKSGVKEGICVVFVPHTTAGITINENADPTVKEDILSALDKIIPNISFKHLEGNS
DAHIKASLVGSSVTVLIENGELVLGTWQGIYFCEFDGPRRRKVYIKIIPS
>Mature_130_residues
MQSVYINTPLREVMIDITKEVEEEVKKSGVKEGICVVFVPHTTAGITINENADPTVKEDILSALDKIIPNISFKHLEGNS
DAHIKASLVGSSVTVLIENGELVLGTWQGIYFCEFDGPRRRKVYIKIIPS

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=95, Percent_Identity=37.8947368421053, Blast_Score=70, Evalue=5e-14,
Organism=Drosophila melanogaster, GI221476589, Length=100, Percent_Identity=42, Blast_Score=84, Evalue=2e-17,
Organism=Drosophila melanogaster, GI221476594, Length=100, Percent_Identity=42, Blast_Score=82, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 14398; Mature: 14398

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: PS01314 UPF0047

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSVYINTPLREVMIDITKEVEEEVKKSGVKEGICVVFVPHTTAGITINENADPTVKEDI
CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHH
LSALDKIIPNISFKHLEGNSDAHIKASLVGSSVTVLIENGELVLGTWQGIYFCEFDGPRR
HHHHHHHHCCCEEEEECCCCCCEEEEEEECCEEEEEEECCCEEEEECCEEEEEECCCCCC
RKVYIKIIPS
EEEEEEEECC
>Mature Secondary Structure
MQSVYINTPLREVMIDITKEVEEEVKKSGVKEGICVVFVPHTTAGITINENADPTVKEDI
CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCHHHHH
LSALDKIIPNISFKHLEGNSDAHIKASLVGSSVTVLIENGELVLGTWQGIYFCEFDGPRR
HHHHHHHHCCCEEEEECCCCCCEEEEEEECCEEEEEEECCCEEEEECCEEEEEECCCCCC
RKVYIKIIPS
EEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]