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The map label for this gene is HipB3

Identifier: 20808559

GI number: 20808559

Start: 2092648

End: 2093019

Strand: Direct

Name: HipB3

Synonym: TTE2174

Alternate gene names: NA

Gene position: 2092648-2093019 (Clockwise)

Preceding gene: 20808544

Following gene: 20808562

Centisome position: 77.81

GC content: 36.29

Gene sequence:

>372_bases
ATGAATTCTGTAGGAGAAAGAATACGATACGCCCGAAAGAAAAACAACTTGACAATACCTGCTCTTAGCAAATTGACAGG
ATTATCCCCAGGAAATTTAAGCGACCTTGAAAACAATAAGTCAATGCCTTCCTCAAACGCTTTAATCAAACTAAAAAACG
CATTAAACGTCTCTATTGACTGGCTTTTGACCGGTGAAATGCCTTCAGAAGTAAAGGAAGAAGAAGAGAAATATTCTGTA
GACAAAAGTGAAGATCTTCTCCTAAAAGCTATAAAAGAACTCCCCGAAGAAAGGAAAAGGGACATAGAAGGATACGTAAA
GGTGTGTCTTAACACAACTGACCTAGAAAAATACTTTGAAGAAAAAAATTAG

Upstream 100 bases:

>100_bases
AATTAATTATGATTAAGAATTAACACTACATTAAATATATATCTGAATTGCGAAATTGTCAATACTAATATCGTAATTCA
GATACAAAGGAGGATTTGGG

Downstream 100 bases:

>100_bases
ATTAATTATTAATCATTTCTTTTCAAAAAAAGTGGCATTTTGTGTCCTTTATCACTCTAAATCACTGACACAAAATGCCA
CTTATATTTTACACTTTTAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Helix-Turn-Helix Domain Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MNSVGERIRYARKKNNLTIPALSKLTGLSPGNLSDLENNKSMPSSNALIKLKNALNVSIDWLLTGEMPSEVKEEEEKYSV
DKSEDLLLKAIKELPEERKRDIEGYVKVCLNTTDLEKYFEEKN

Sequences:

>Translated_123_residues
MNSVGERIRYARKKNNLTIPALSKLTGLSPGNLSDLENNKSMPSSNALIKLKNALNVSIDWLLTGEMPSEVKEEEEKYSV
DKSEDLLLKAIKELPEERKRDIEGYVKVCLNTTDLEKYFEEKN
>Mature_123_residues
MNSVGERIRYARKKNNLTIPALSKLTGLSPGNLSDLENNKSMPSSNALIKLKNALNVSIDWLLTGEMPSEVKEEEEKYSV
DKSEDLLLKAIKELPEERKRDIEGYVKVCLNTTDLEKYFEEKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14003; Mature: 14003

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSVGERIRYARKKNNLTIPALSKLTGLSPGNLSDLENNKSMPSSNALIKLKNALNVSID
CCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE
WLLTGEMPSEVKEEEEKYSVDKSEDLLLKAIKELPEERKRDIEGYVKVCLNTTDLEKYFE
EEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EKN
CCC
>Mature Secondary Structure
MNSVGERIRYARKKNNLTIPALSKLTGLSPGNLSDLENNKSMPSSNALIKLKNALNVSID
CCCHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEE
WLLTGEMPSEVKEEEEKYSVDKSEDLLLKAIKELPEERKRDIEGYVKVCLNTTDLEKYFE
EEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
EKN
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA