Click here to switch to the map view.

The map label for this gene is yadD [C]

Identifier: 20808484

GI number: 20808484

Start: 2013072

End: 2013881

Strand: Reverse

Name: yadD [C]

Synonym: TTE2086

Alternate gene names: 20808484

Gene position: 2013881-2013072 (Counterclockwise)

Preceding gene: 20808485

Following gene: 20808483

Centisome position: 74.88

GC content: 34.94

Gene sequence:

>810_bases
ATGTTTTCTGATTTAACAGACGATATATTAAGCTATTTTTTGGGGATACAGCACACTAAAATAGAGGAACTTAACGTGGA
GTTTCCAAGGGTTGAAATGAGAGAAAGCGATATGATCTTTAAGTGTATTACAAAAGAGGGAAACACCATTGCCGTACATA
TAGAATTCCAGTCAGATAATGACAGAGAAATGCCTTACAGAATGTTAAGGTACGCTGTTGAAATAATGGAGAAACATGAA
TTAGTTCCCTATCAGGTTGTTGTGTACATAGGTGAAAACAACTTAAATATGGCCGATGGAGTGAATTTTGACTTTGGAGA
GGAAAATTTTTTGAAGTACAGGTACAAGATAATAGATGTGGGGGAAATAAAATTTAATGAGATAACACAAACTAACTATT
ATGAACTGTTCACGCTGCTTCCTTTGATGGACAAAGAAAGGAGAAAAAAAGAAAAAGAACTTTATCTGAAAGAATGCGTA
GAGATGATAAAAAAGATTCCTCTGGAACAGGAAAGAAAGAGAGAAGTGGCTGCAAGAGCCAGAATACTTGCAGAGCTGGT
GTATGAAGAGGAAATTATTGATAAGACGTTTGCGGAGGTGATAAAAATGCTAAATTTAGAGAAGTCAGCAACTTTTAGAA
GGTTGATAGAAGAAGGAAGAAAAGAAGGGATAGAAGAAGGGAGAAAAGAAGGGGAAAAAGAAGCTAAAATAACAATAGCG
AAAGAGCTTTTAAAAGAAGGTATGGACATTGCTAAAGTAGCTAAAGTTACAGGGCTTTCTATTGATGAGATAAAGAAGCT
GTTAAATTAA

Upstream 100 bases:

>100_bases
TTTAAAAATGTCTGTCCCTTTCTTTTTAAGTGTGGTATAATTGTGGTAAGAGATAATGGAGGGAGAAATTGTGGGAAAAT
ACGATATAACGTTAAAAGAT

Downstream 100 bases:

>100_bases
AGTGGTGATAAAGATGTTAAATTTAGAGAAGTCAGCAACTTTTAGAAGGTTGATAGAAGAAGGGAGAAAAGAAGGAGAGA
AAGAAGCAAAACTAGCTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 269

Protein sequence:

>269_residues
MFSDLTDDILSYFLGIQHTKIEELNVEFPRVEMRESDMIFKCITKEGNTIAVHIEFQSDNDREMPYRMLRYAVEIMEKHE
LVPYQVVVYIGENNLNMADGVNFDFGEENFLKYRYKIIDVGEIKFNEITQTNYYELFTLLPLMDKERRKKEKELYLKECV
EMIKKIPLEQERKREVAARARILAELVYEEEIIDKTFAEVIKMLNLEKSATFRRLIEEGRKEGIEEGRKEGEKEAKITIA
KELLKEGMDIAKVAKVTGLSIDEIKKLLN

Sequences:

>Translated_269_residues
MFSDLTDDILSYFLGIQHTKIEELNVEFPRVEMRESDMIFKCITKEGNTIAVHIEFQSDNDREMPYRMLRYAVEIMEKHE
LVPYQVVVYIGENNLNMADGVNFDFGEENFLKYRYKIIDVGEIKFNEITQTNYYELFTLLPLMDKERRKKEKELYLKECV
EMIKKIPLEQERKREVAARARILAELVYEEEIIDKTFAEVIKMLNLEKSATFRRLIEEGRKEGIEEGRKEGEKEAKITIA
KELLKEGMDIAKVAKVTGLSIDEIKKLLN
>Mature_269_residues
MFSDLTDDILSYFLGIQHTKIEELNVEFPRVEMRESDMIFKCITKEGNTIAVHIEFQSDNDREMPYRMLRYAVEIMEKHE
LVPYQVVVYIGENNLNMADGVNFDFGEENFLKYRYKIIDVGEIKFNEITQTNYYELFTLLPLMDKERRKKEKELYLKECV
EMIKKIPLEQERKREVAARARILAELVYEEEIIDKTFAEVIKMLNLEKSATFRRLIEEGRKEGIEEGRKEGEKEAKITIA
KELLKEGMDIAKVAKVTGLSIDEIKKLLN

Specific function: Unknown

COG id: COG5464

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the yadD/yfaD/yhgA/yjiP family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010106
- InterPro:   IPR006842 [H]

Pfam domain/function: PF04754 Transposase_31 [H]

EC number: NA

Molecular weight: Translated: 31743; Mature: 31743

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSDLTDDILSYFLGIQHTKIEELNVEFPRVEMRESDMIFKCITKEGNTIAVHIEFQSDN
CCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCHHCCCCHHEEEEECCCCEEEEEEEECCCC
DREMPYRMLRYAVEIMEKHELVPYQVVVYIGENNLNMADGVNFDFGEENFLKYRYKIIDV
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHEEEEEEEEE
GEIKFNEITQTNYYELFTLLPLMDKERRKKEKELYLKECVEMIKKIPLEQERKREVAARA
CCEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RILAELVYEEEIIDKTFAEVIKMLNLEKSATFRRLIEEGRKEGIEEGRKEGEKEAKITIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KELLKEGMDIAKVAKVTGLSIDEIKKLLN
HHHHHCCCCHHHHHHHHCCCHHHHHHHHC
>Mature Secondary Structure
MFSDLTDDILSYFLGIQHTKIEELNVEFPRVEMRESDMIFKCITKEGNTIAVHIEFQSDN
CCCCHHHHHHHHHHCCCCCCHHHCCCCCCCCHHCCCCHHEEEEECCCCEEEEEEEECCCC
DREMPYRMLRYAVEIMEKHELVPYQVVVYIGENNLNMADGVNFDFGEENFLKYRYKIIDV
CCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHEEEEEEEEE
GEIKFNEITQTNYYELFTLLPLMDKERRKKEKELYLKECVEMIKKIPLEQERKREVAARA
CCEEECCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
RILAELVYEEEIIDKTFAEVIKMLNLEKSATFRRLIEEGRKEGIEEGRKEGEKEAKITIA
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
KELLKEGMDIAKVAKVTGLSIDEIKKLLN
HHHHHCCCCHHHHHHHHCCCHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677609 [H]