Click here to switch to the map view.

The map label for this gene is 20808475

Identifier: 20808475

GI number: 20808475

Start: 2006055

End: 2006618

Strand: Reverse

Name: 20808475

Synonym: TTE2077

Alternate gene names: NA

Gene position: 2006618-2006055 (Counterclockwise)

Preceding gene: 20808476

Following gene: 20808474

Centisome position: 74.61

GC content: 40.96

Gene sequence:

>564_bases
TTGAGCAAGATAATCAAAATAGGCATTATTACTGCTGTGTTTGTATTTCTTGCAGCTTTTTTAATACTTAACAGTGTTCA
GGGGACAGTAAATGTTGTTGCAGCAGCAAAACCGATAAACGCAGGCACAGTAATAACTCAGGACATGCTTACCACAAAAA
GCATTCCTGCAAGCCTTGCAGCAGATCTAGTGAAGAATCCTCAGGAGATTGTAGGCAAAAGCCTTAATACTTCACGTGTG
AAAGGCGATTTCATACCGCACAGCATAGTTATGCAGAAGGGACTTGAAGTAGCTCCAGGCGATGTTTTAATAAGCATAAA
CGTTCCTTATGAAGACGCAAAGCTTATTTCCGTCGGAGACACAATAAGTCTTGTACTTTTATCAAATATTGCTGGAGGTG
CAAATCAGACAGTAAGCGGGCTGAAGGTTTACTCAATAGAGCAAACAACGTCAGCGGTTAACGGTACTGTAAGCACAATT
GCGGTACTTGAAACAACTCCCGACAAAGCTTCACTGATAGCCCCTTATGTCAAGTCAAACAGTTTCAAAATTTTCAAGGA
GTGA

Upstream 100 bases:

>100_bases
CTTTTGATGAAGTAAAAGACGGGATTGAGCTTTATCTTTTAAACCAAAAGAAGCTTGATTTTTATCACAAAAAAATAAAG
GAATGGGAAGGTGAAGGAAA

Downstream 100 bases:

>100_bases
TGTAAAAATGATAATTTCAATCTTCTCCCCTAAAGGGGGTGTCGGCAAAACAACCATAGCTCTTGCCCTTTCAAAAACAG
CAAGTAAAAAATTAAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: SAF Domain Family; SAF Domain Family Protein

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MSKIIKIGIITAVFVFLAAFLILNSVQGTVNVVAAAKPINAGTVITQDMLTTKSIPASLAADLVKNPQEIVGKSLNTSRV
KGDFIPHSIVMQKGLEVAPGDVLISINVPYEDAKLISVGDTISLVLLSNIAGGANQTVSGLKVYSIEQTTSAVNGTVSTI
AVLETTPDKASLIAPYVKSNSFKIFKE

Sequences:

>Translated_187_residues
MSKIIKIGIITAVFVFLAAFLILNSVQGTVNVVAAAKPINAGTVITQDMLTTKSIPASLAADLVKNPQEIVGKSLNTSRV
KGDFIPHSIVMQKGLEVAPGDVLISINVPYEDAKLISVGDTISLVLLSNIAGGANQTVSGLKVYSIEQTTSAVNGTVSTI
AVLETTPDKASLIAPYVKSNSFKIFKE
>Mature_186_residues
SKIIKIGIITAVFVFLAAFLILNSVQGTVNVVAAAKPINAGTVITQDMLTTKSIPASLAADLVKNPQEIVGKSLNTSRVK
GDFIPHSIVMQKGLEVAPGDVLISINVPYEDAKLISVGDTISLVLLSNIAGGANQTVSGLKVYSIEQTTSAVNGTVSTIA
VLETTPDKASLIAPYVKSNSFKIFKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19555; Mature: 19424

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIIKIGIITAVFVFLAAFLILNSVQGTVNVVAAAKPINAGTVITQDMLTTKSIPASLA
CCCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHHHHCCCCHHHH
ADLVKNPQEIVGKSLNTSRVKGDFIPHSIVMQKGLEVAPGDVLISINVPYEDAKLISVGD
HHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEECC
TISLVLLSNIAGGANQTVSGLKVYSIEQTTSAVNGTVSTIAVLETTPDKASLIAPYVKSN
HHEEHHHHHCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEEECCCCCHHEEEHHHCCC
SFKIFKE
CEEEEEC
>Mature Secondary Structure 
SKIIKIGIITAVFVFLAAFLILNSVQGTVNVVAAAKPINAGTVITQDMLTTKSIPASLA
CCEEHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCEEEHHHHHHCCCCHHHH
ADLVKNPQEIVGKSLNTSRVKGDFIPHSIVMQKGLEVAPGDVLISINVPYEDAKLISVGD
HHHHCCHHHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCEEEEEECCCCCCEEEEECC
TISLVLLSNIAGGANQTVSGLKVYSIEQTTSAVNGTVSTIAVLETTPDKASLIAPYVKSN
HHEEHHHHHCCCCCCCCCCCEEEEEEHHHHHHCCCCEEEEEEEECCCCCHHEEEHHHCCC
SFKIFKE
CEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA